RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	FBXO30	Q8TB52	745 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ADAMTS15	Q8TE58	950 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SMPDL3B	Q92485	455 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	HOXB13	Q92826	284 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	COQ8B	Q96D53	544 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	FAM120B	Q96EK7	910 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	C16orf58	Q96GQ5	468 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ZIM3	Q96PE6	472 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	STAC	Q99469	402 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GPATCH1	Q9BRR8	931 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SLC39A3	Q9BRY0	314 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	YIPF4	Q9BSR8	244 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	C1orf50	Q9BV19	199 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ACTRT3	Q9BYD9	372 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PRRG4	Q9BZD6	226 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SSU72	Q9NP77	194 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	KCNK9	Q9NPC2	374 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DUSP22	Q9NRW4	184 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	NOP53	Q9NZM5	478 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CLCF1	Q9UBD9	225 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PCDHGB4	Q9UN71	923 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ZNF175	Q9Y473	711 aa		11.13	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584		A0A1W2PNV4	684 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	MSTN	O14793	375 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	HCRTR2	O43614	444 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.12	□□□□□ -0.63	2e-22	■■■■■ 95.4
CDK5RAP2-211	ENST00000479584	GOSR1	O95249	250 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	OXSR1	O95747	527 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	TGM6	O95932	706 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	HMGN2	P05204	90 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ACP2	P11117	423 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	FCGR2A	P12318	317 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ME2	P23368	584 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DNAJA1	P31689	397 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ETV4	P43268	484 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ABCE1	P61221	599 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	OCRL	Q01968	901 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	EMX2	Q04743	252 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ZNF844	Q08AG5	666 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	LASP1	Q14847	261 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PTGR1	Q14914	329 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PGS1	Q32NB8	556 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GALNT10	Q86SR1	603 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	WDR75	Q8IWA0	830 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	VPS37A	Q8NEZ2	397 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	OR5M1	Q8NGP8	315 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	LINC01560	Q8TB33	94 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	FAM110B	Q8TC76	370 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ACTRT2	Q8TDY3	377 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ZBTB8A	Q96BR9	441 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GIMAP5	Q96F15	307 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	C3orf30	Q96M34	536 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DACH2	Q96NX9	599 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DUSP26	Q9BV47	211 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PINK1	Q9BXM7	581 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	RTN4R	Q9BZR6	473 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PIGU	Q9H490	435 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	NEUROD4	Q9HD90	331 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GIN1	Q9NXP7	522 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GIMAP2	Q9UG22	337 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	RAB21	Q9UL25	225 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	FREM3	P0C091	2139 aa		11.12	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	NCKAP5	O14513	1909 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	HCFC1	P51610	2035 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DUXA	A6NLW8	204 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	C17orf51	A8MQB3	221 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584		A8MXE2	369 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GTPBP1	O00178	669 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SYNGR4	O95473	234 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	C6orf47	O95873	294 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	G6PD	P11413	515 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ZNF17	P17021	662 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	DNASE1	P24855	282 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	EIF1	P41567	113 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	RPL14	P50914	215 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	ART1	P52961	327 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CLDN15	P56746	228 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CLDN8	P56748	225 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CEP85L	Q5SZL2	805 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PDSS1	Q5T2R2	415 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PPP4R4	Q6NUP7	873 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CDC73	Q6P1J9	531 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	APOOL	Q6UXV4	268 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SPNS3	Q6ZMD2	512 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	MTERF4	Q7Z6M4	381 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	KRTCAP2	Q8N6L1	136 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	SFXN5	Q8TD22	340 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	CDS1	Q92903	461 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	NINJ1	Q92982	152 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PGM2	Q96G03	612 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PKNOX2	Q96KN3	472 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	PAIP2	Q9BPZ3	127 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	GALNT8	Q9NY28	637 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	VDAC3	Q9Y277	283 aa		11.11	□□□□□ -0.63
CDK5RAP2-211	ENST00000479584	RAP2C	Q9Y3L5	183 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms