RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SLC38A5Q8WUX1 472 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 XAGE5Q8WWM1 108 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 METTL21AQ8WXB1 218 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 SLC9A6Q92581 669 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 CDS1Q92903 461 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 FAM162AQ96A26 154 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 C8orf44Q96CB5 159 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 DUS3LQ96G46 650 aaKnown RBP6.15□□□□□ -1.42
USP48-208ENST00000479177 SLC35A4Q96G79 324 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 LRGUKQ96M69 825 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 RNF145Q96MT1 663 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 SLC46A1Q96NT5 459 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 BTBD9Q96Q07 612 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 STACQ99469 402 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 NUDT9Q9BW91 350 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 ITPAQ9BY32 194 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 SEMA4CQ9C0C4 833 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 OR8D2Q9GZM6 311 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 OR10A5Q9H207 317 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 PIGUQ9H490 435 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 ZNF552Q9H707 407 aaPredicted RBP6.15□□□□□ -1.42
USP48-208ENST00000479177 DCAF13Q9NV06 445 aaKnown RBP6.15□□□□□ -1.42
USP48-208ENST00000479177 OLAHQ9NV23 265 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 GIN1Q9NXP7 522 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 COPS7AQ9UBW8 275 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 PRODH2Q9UF12 536 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 BCAP29Q9UHQ4 241 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 ZNF223Q9UK11 482 aaPredicted RBP6.15□□□□□ -1.42
USP48-208ENST00000479177 LIPT1Q9Y234 373 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 HS3ST3B1Q9Y662 390 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 CLCA3PQ9Y6N3 262 aa6.15□□□□□ -1.42
USP48-208ENST00000479177 DSPPQ9NZW4 1301 aa6.15□□□□□ -1.43
USP48-208ENST00000479177 PCSK5Q92824 1860 aa6.15□□□□□ -1.43
USP48-208ENST00000479177 LOC101059948A0A1B0GTJ6 334 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 DHRS12A0PJE2 317 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GXYLT2A0PJZ3 443 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 TMEM247A6NEH6 219 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 FRG2CA6NGY1 282 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 DUXAA6NLW8 204 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 OR6C76A6NM76 312 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 A8MVJ9 347 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 C5orf58C9J3I9 102 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SOCS6O14544 535 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 KIAA0513O60268 411 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GMNNO75496 209 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PDE9AO76083 593 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SEC24DO94855 1032 aaPredicted RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 PGM3O95394 542 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 H6PDO95479 791 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SERPINA1P01009 418 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 IGHEP01854 428 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 OPN1SWP03999 348 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GPIP06744 558 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 NR2F1P10589 423 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 COX6A1P12074 109 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 TCN2P20062 427 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 F8A1P23610 371 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 MMP11P24347 488 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 AQP1P29972 269 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 KDELR2P33947 212 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GABRA3P34903 492 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 CLCN2P51788 898 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 CRISP3P54108 245 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SLC26A5P58743 744 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 RPS18P62269 152 aaKnown RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 POU6F2P78424 691 aaPredicted RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 HPCAP84074 193 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PSG6Q00889 435 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 RHDQ02161 417 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 IL10RAQ13651 578 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GNA13Q14344 377 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 RCN1Q15293 331 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ZNHIT3Q15649 155 aaPredicted RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 CRB2Q5IJ48 1285 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 DCST2Q5T1A1 773 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 IRAK1BP1Q5VVH5 260 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ZFP1Q6P2D0 407 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 AAGABQ6PD74 315 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ENPP6Q6UWR7 440 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 FRRS1Q6ZNA5 592 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 LRRC74BQ6ZQY2 392 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 OLIG3Q7RTU3 272 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 C16orf62Q7Z3J2 963 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PPP1R32Q7Z5V6 425 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PATL1Q86TB9 770 aaKnown RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 SLC44A2Q8IWA5 706 aaPredicted RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 ZNF441Q8N8Z8 693 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 APCDD1LQ8NCL9 501 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 B3GNT7Q8NFL0 401 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 OR1N1Q8NGS0 311 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 FAM110BQ8TC76 370 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GPR151Q8TDV0 419 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SLC26A7Q8TE54 656 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 CANT1Q8WVQ1 401 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PYDC1Q8WXC3 89 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 PIK3R3Q92569 461 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 STMN2Q93045 179 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SLCO4A1Q96BD0 722 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 TAMM41Q96BW9 452 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 NXPE2Q96DL1 559 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms