RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 RFX3P48380 749 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 WDR4P57081 412 aaKnown RBP21.16■□□□□ 0.98
C9orf3-215ENST00000478473 POU6F2P78424 691 aaPredicted RBP21.16■□□□□ 0.98
C9orf3-215ENST00000478473 BST1Q10588 318 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 STX5Q13190 355 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 LASP1Q14847 261 aaKnown RBP21.16■□□□□ 0.98
C9orf3-215ENST00000478473 PDCD2Q16342 344 aaPredicted RBP21.16■□□□□ 0.98
C9orf3-215ENST00000478473 BEND6Q5SZJ8 279 aaPredicted RBP21.16■□□□□ 0.98
C9orf3-215ENST00000478473 OGFOD2Q6N063 350 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 ACTRT2Q8TDY3 377 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 ZNF559Q9BR84 538 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 PIGQQ9BRB3 760 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 MEAF6Q9HAF1 191 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 ZNF337Q9Y3M9 751 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 A0A087WZY1 265 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 RNASET2O00584 256 aaKnown RBP21.15■□□□□ 0.98
C9orf3-215ENST00000478473 NDUFB5O43674 189 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 SCN2BO60939 215 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 TNFRSF21O75509 655 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 CRHP06850 196 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 PCYT1AP49585 367 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 EEFSECP57772 596 aaKnown RBP21.15■□□□□ 0.98
C9orf3-215ENST00000478473 HBA1P69905 142 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 SRYQ05066 204 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 FOXF2Q12947 444 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 RAET1LQ5VY80 246 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 FIGNL1Q6PIW4 674 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 SZRD1Q7Z422 152 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 FBXO30Q8TB52 745 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 TESCQ96BS2 214 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 SNX8Q9Y5X2 465 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 AP4B1Q9Y6B7 739 aa21.15■□□□□ 0.98
C9orf3-215ENST00000478473 NUP214P35658 2090 aaPredicted RBP21.15■□□□□ 0.98
C9orf3-215ENST00000478473 CCDC168Q8NDH2 2452 aa21.14■□□□□ 0.98
C9orf3-215ENST00000478473 NPIPB9F8W1W9 429 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 ZNF17P17021 662 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 DGKQP52824 942 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 SORDQ00796 357 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 AP1ARQ63HQ0 302 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 BHLHB9Q6PI77 547 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 CDS1Q92903 461 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 TLCD1Q96CP7 247 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 YIPF4Q9BSR8 244 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 HOXD1Q9GZZ0 328 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 MED12LQ86YW9 2145 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 SPG11Q96JI7 2443 aa21.14■□□□□ 0.97
C9orf3-215ENST00000478473 TMEM120BA0PK00 339 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 SNNO75324 88 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 ERLIN1O75477 346 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 TGM6O95932 706 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 POU3F2P20265 443 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 PSMA4P25789 261 aaKnown RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 SUCLG1P53597 346 aaKnown RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 MTERF4Q7Z6M4 381 aaKnown RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 GTPBP8Q8N3Z3 284 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 MEIOBQ8N635 442 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 METTL25Q8N6Q8 603 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 RAB3IL1Q8TBN0 382 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 ADAMTS15Q8TE58 950 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 PIGMQ9H3S5 423 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 FAF1Q9UNN5 650 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-215ENST00000478473 ZNF175Q9Y473 711 aa21.13■□□□□ 0.97
C9orf3-215ENST00000478473 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 TNFSF13O75888 250 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 LBPP18428 481 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 UQCRC1P31930 480 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 KIR2DL3P43628 341 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 MYBPHQ13203 477 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 TP53BP2Q13625 1128 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 DPY19L1Q2PZI1 675 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 KLHL26Q53HC5 615 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 CCNJQ5T5M9 372 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 HHATQ5VTY9 493 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 OR2A2Q6IF42 318 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 GALNT10Q86SR1 603 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 KIF18BQ86Y91 864 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 GRAMD2AQ8IUY3 354 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 CHDHQ8NE62 594 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-215ENST00000478473 MIPOL1Q8TD10 442 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 FAM222BQ8WU58 562 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 NUF2Q9BZD4 464 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 PNPOQ9NVS9 261 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 THAP1Q9NVV9 213 aa21.12■□□□□ 0.97
C9orf3-215ENST00000478473 SCDO00767 359 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 CTAG2O75638 210 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 GUSBP08236 651 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 PHC1P78364 1004 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 DAZAP2Q15038 168 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-215ENST00000478473 CD226Q15762 336 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 FLYWCH1Q4VC44 716 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 DCST2Q5T1A1 773 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 OR4F3Q6IEY1 312 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 GGNQ86UU5 652 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 JADE3Q92613 823 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 ZBTB8AQ96BR9 441 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 INTS12Q96CB8 462 aaKnown RBP21.11■□□□□ 0.97
C9orf3-215ENST00000478473 OTUB1Q96FW1 271 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-215ENST00000478473 DPY30Q9C005 99 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 TMBIM4Q9HC24 238 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 CRIM1Q9NZV1 1036 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms