RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 C5orf51A6NDU8 294 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 PLPP1O14494 284 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 TNFRSF17Q02223 184 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 DPTQ07507 201 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 LTB4RQ15722 352 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 IGFN1Q86VF2 1251 aa13.33□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.27
NPHP4-208ENST00000478423 TARM1B6A8C7 271 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 INMT-MINDY4F8WBC2 141 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 EMX1Q04741 257 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 PIWIL3Q7Z3Z3 882 aaKnown RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 NAT6Q93015 286 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 BTBD2Q9BX70 525 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 OR52D1Q9H346 318 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 P04436 131 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 UBL4AP11441 157 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 PRPS1P60891 318 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 CXCR4P61073 352 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 SLC37A2Q8TED4 501 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ASB15Q8WXK1 588 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 PPP1R14BQ96C90 147 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 MOV10Q9HCE1 1003 aaKnown RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 TBC1D29Q9UFV1 150 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 A0A0X1KG70 313 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 PNMTP11086 282 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ITGA3P26006 1051 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 SFTPDP35247 375 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF84P51523 738 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 DLEU7Q6UYE1 221 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 TCTN2Q96GX1 697 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 MAP3K3Q99759 626 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
NPHP4-208ENST00000478423 ACOT13Q9NPJ3 140 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 CUTCQ9NTM9 273 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 DHDHQ9UQ10 334 aa13.33□□□□□ -0.28
NPHP4-208ENST00000478423 TRBV5-4A0A0C4DH59 114 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SLC6A12P48065 614 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PRKXP51817 358 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 TLE3Q04726 772 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PLP2Q04941 152 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 MRPL2Q5T653 305 aaKnown RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF691Q5VV52 312 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 FAM71E1Q6IPT2 247 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SDR9C7Q8NEX9 313 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 AMDHD1Q96NU7 426 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 DUSP23Q9BVJ7 150 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 C1QTNF3Q9BXJ4 246 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 B4GALT7Q9UBV7 327 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 EEF1E1O43324 174 aaKnown RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SYNGR4O95473 234 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ITGAMP11215 1152 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 BCL6P41182 706 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SOX3P41225 446 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 CD97P48960 835 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 MFSD13AQ14CX5 517 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PRAMEF17Q5VTA0 474 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 LILRA6Q6PI73 481 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 CYHR1Q6ZMK1 362 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ALDH16A1Q8IZ83 802 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PITX2Q99697 317 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ALG8Q9BVK2 526 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ABCG5Q9H222 651 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 OR51E2Q9H255 320 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PIGUQ9H490 435 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 TRBV4-1A0A0J9YWV2 114 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 OR2T1O43869 369 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SLC19A2O60779 497 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 CHMP24386 653 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PDX1P52945 283 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SWI5Q1ZZU3 235 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 HSF5Q4G112 596 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SLC6A18Q96N87 628 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 KIR3DX1Q9H7L2 352 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 HPF1Q9NWY4 346 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 KLHL21Q9UJP4 597 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 CBLCQ9ULV8 474 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PPT2Q9UMR5 302 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
NPHP4-208ENST00000478423 PLEKHA6Q9Y2H5 1048 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
NPHP4-208ENST00000478423 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms