RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ATP6V1C1P21283 382 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 TBXA2RP21731 343 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 CRYGSP22914 178 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 ADSLP30566 484 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 SERPINB5P36952 375 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 EIF1P41567 113 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 KIR2DL2P43627 348 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 EIF1AXP47813 144 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 FAM27E3Q08E93 113 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 PDE7AQ13946 482 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 GALNTL6Q49A17 601 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 KANK2Q63ZY3 851 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 MFSD12Q6NUT3 480 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 C20orf204Q6ZNR8 217 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 SH2D5Q6ZV89 423 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 C10orf107Q8IVU9 208 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 GTPBP8Q8N3Z3 284 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 EPS8L3Q8TE67 593 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 PIK3R3Q92569 461 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 HOXB13Q92826 284 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 POM121Q96HA1 1249 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 REXO5Q96IC2 774 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 APOPT1Q96IL0 206 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 C18orf12Q96KH6 178 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 EGLN2Q96KS0 407 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 FCRL1Q96LA6 429 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 PRPF18Q99633 342 aaKnown RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 OPN3Q9H1Y3 402 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 TIGARQ9NQ88 270 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 KLHL28Q9NXS3 571 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 VDAC3Q9Y277 283 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 A0A1W2PQD3 144 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 GXYLT2A0PJZ3 443 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 GJE1A6NN92 205 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 NPHS1O60500 1241 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 SHBGP04278 402 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 ELK4P28324 431 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 FRKP42685 505 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 SUCLG1P53597 346 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 CLDN20P56880 219 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 RAC1P63000 192 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 POU6F2P78424 691 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 PCLAFQ15004 111 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 MLC1Q15049 377 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 ANKRD26P1Q6NSI1 321 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 BHLHB9Q6PI77 547 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 MTERF4Q7Z6M4 381 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 OR5M1Q8NGP8 315 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 TWIST2Q8WVJ9 160 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 CIDECQ96AQ7 238 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 PIK3IP1Q96FE7 263 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 WFIKKN1Q96NZ8 548 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 STACQ99469 402 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 CCL19Q99731 98 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 GATA5Q9BWX5 397 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 HOXD1Q9GZZ0 328 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 DUSP22Q9NRW4 184 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 ZCCHC3Q9NUD5 404 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 FLRT3Q9NZU0 649 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 DNAJC15Q9Y5T4 150 aa12.99□□□□□ -0.33
SMARCE1-209ENST00000478349 C17orf51A8MQB3 221 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 B4DXG7 233 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 GMFGO60234 142 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 LYPLA1O75608 230 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 KCNK2O95069 426 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 LINC00032P0C843 101 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 HOXC12P31275 282 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 MAP3K8P41279 467 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 NR1H2P55055 460 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 PRSS53Q2L4Q9 553 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 LSM12Q3MHD2 195 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 SPDYE7PQ495Y7 208 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 RFTN2Q52LD8 501 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 BEX5Q5H9J7 111 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 CPTPQ5TA50 214 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF474Q6S9Z5 364 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 OR56A1Q8NGH5 318 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 OR10D3Q8NH80 312 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 B4GALNT2Q8NHY0 566 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 ARL8AQ96BM9 186 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 BTBD2Q9BX70 525 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 TNFRSF12AQ9NP84 129 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 GIN1Q9NXP7 522 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 C6orf203Q9P0P8 240 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms