RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TPSB2P20231 275 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CD22P20273 847 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 MAGEA9P43362 315 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 RGRP47804 291 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 PSMD8P48556 350 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CSNK1DP48730 415 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CCNHP51946 323 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 PLTPP55058 493 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 STARD6P59095 220 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 MRPS25P82663 173 aaKnown RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 CDK16Q00536 496 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ACSM1Q08AH1 577 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 SIGLEC14Q08ET2 396 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ZNF415Q09FC8 603 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CDH17Q12864 832 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 COX10Q12887 443 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CUL1Q13616 776 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ELAVL3Q14576 367 aaKnown RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 MORF4L2Q15014 288 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 TPSAB1Q15661 275 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 NPTX1Q15818 432 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 TTC31Q49AM3 519 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 DNAJC21Q5F1R6 531 aaKnown RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 SLC35D3Q5M8T2 416 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ARMC12Q5T9G4 340 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 FAM46CQ5VWP2 391 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 TMEM215Q68D42 235 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 ZNF776Q68DI1 518 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 ARHGAP22Q7Z5H3 698 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 PTAR1Q7Z6K3 402 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 PRUNE1Q86TP1 453 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CDC20BQ86Y33 519 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 KIRREL3Q8IZU9 778 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 PDIK1LQ8N165 341 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 STK40Q8N2I9 435 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 RAB42Q8N4Z0 105 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 DCLK2Q8N568 766 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 DNAAF3Q8N9W5 541 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 OR6K2Q8NGY2 324 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 OR2T3Q8NH03 318 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 RPLP0P6Q8NHW5 317 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 GANCQ8TET4 914 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 IFT81Q8WYA0 676 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 IMP4Q96G21 291 aaKnown RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 TBL1YQ9BQ87 522 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 MGME1Q9BQP7 344 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 CENPOQ9BU64 300 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 FICDQ9BVA6 458 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 FAM129AQ9BZQ8 928 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 LMAN1LQ9HAT1 526 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 XAB2Q9HCS7 855 aaKnown RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 ZDHHC4Q9NPG8 344 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 BFARQ9NZS9 450 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 IL36AQ9UHA7 158 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 KLK13Q9UKR3 277 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 MMP17Q9ULZ9 603 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 STUB1Q9UNE7 303 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 NCKAP1Q9Y2A7 1128 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 SNX24Q9Y343 169 aa3.4□□□□□ -1.87
UBR3-209ENST00000477461 V9GYY5 206 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 MUC22E2RYF6 1773 aaPredicted RBP3.4□□□□□ -1.87
UBR3-209ENST00000477461 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 A0A1W2PPK0 400 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 WASH3PC4AMC7 463 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 GOLGA8MH3BSY2 632 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 ARPC2O15144 300 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 PGLSO95336 258 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 AP2A1O95782 977 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CD160O95971 181 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 AGTP01019 485 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 EPOP01588 193 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 FGF1P05230 155 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 IRF2P14316 349 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 HLA-DPA1P20036 260 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CDH3P22223 829 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 HNF4AP41235 474 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 RPL21P46778 160 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 RPS9P46781 194 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 NPY2RP49146 381 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 RPL26P61254 145 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 ELP6Q0PNE2 266 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 KCNJ11Q14654 390 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 HERC3Q15034 1050 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CST6Q15828 149 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 PHKG1Q16816 387 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 POM121L1PQ3SYA9 428 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 FAM182AQ5T1J6 154 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 C9orf64Q5T6V5 341 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 DUPD1Q68J44 220 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 ZNF343Q6P1L6 599 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CASC4Q6P4E1 433 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 KDELC1Q6UW63 502 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 ZBTB49Q6ZSB9 765 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CENPUQ71F23 418 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 RTN4RL2Q86UN3 420 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CACUL1Q86Y37 369 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms