RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TSPAN10Q9H1Z9 355 aaPredicted RBP17.52■□□□□ 0.4
VARS2-209ENST00000477288 DYNLRB1Q9NP97 96 aa17.52■□□□□ 0.4
VARS2-209ENST00000477288 TUBG2Q9NRH3 451 aa17.52■□□□□ 0.4
VARS2-209ENST00000477288 M0R3H8 397 aa17.52■□□□□ 0.4
VARS2-209ENST00000477288 ZNF780AO75290 641 aaPredicted RBP17.52■□□□□ 0.4
VARS2-209ENST00000477288 PPP1R35Q8TAP8 253 aa17.52■□□□□ 0.4
VARS2-209ENST00000477288 EBF1Q9UH73 591 aa17.52■□□□□ 0.4
VARS2-209ENST00000477288 CD300LBA8K4G0 201 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 PTGESO14684 152 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 CER1O95813 267 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 BMP4P12644 408 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 TIMP2P16035 220 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 RAB3AP20336 220 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 SLC6A8P48029 635 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 ERVPABLB-1P60509 514 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 PRPS1P60891 318 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 ESX1Q8N693 406 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 FUBP1Q96AE4 644 aaKnown RBP17.52■□□□□ 0.39
VARS2-209ENST00000477288 INPP5KQ9BT40 448 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 C19orf12Q9NSK7 152 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 PLSCR5A0PG75 271 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 F8W036 122 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 CRABP1P29762 137 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 BLOC1S1P78537 153 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 RBPJQ06330 500 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 TCHHQ07283 1943 aa17.52■□□□□ 0.39
VARS2-209ENST00000477288 TRBV11-1A0A0K0K1C0 115 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 AGPAT2O15120 278 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 MEX3DQ86XN8 651 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 BBS1Q8NFJ9 593 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 OR4K15Q8NH41 348 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RLN3Q8WXF3 142 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 SLC45A3Q96JT2 553 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 MACROD1Q9BQ69 325 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RAB9BQ9NP90 201 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 PISDQ9UG56 409 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 AK6Q9Y3D8 172 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 UBFD1O14562 309 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 LDB3O75112 727 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 JRKO75564 520 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 UBL4AP11441 157 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 IL4RP24394 825 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RGS6P49758 472 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 TAS2R20P59543 309 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 SEC61A1P61619 476 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 ZNF808Q8N4W9 903 aaPredicted RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 CNOT9Q92600 299 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 SLC25A18Q9H1K4 315 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 UNKLQ9H9P5 680 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 A8MXE2 369 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 CLN5O75503 358 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 GGT1P19440 569 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 HOXA11P31270 313 aaPredicted RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 TNFRSF4P43489 277 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RAB6CQ53S08 254 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 FAM198BQ6UWH4 519 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 SDR9C7Q8NEX9 313 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RAB6CQ9H0N0 254 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 MED16Q9Y2X0 877 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 NDUFB2O95178 105 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 MSR1P21757 451 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 PRSS3P35030 304 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 XCR1P46094 333 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 NCS1P62166 190 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 CHRNEQ04844 493 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 CDRT4Q8N9R6 151 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RSC1A1Q92681 617 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 USP36Q9P275 1121 aaKnown RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 A6NIZ1 184 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RAP1BP61224 184 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 RAP1AP62834 184 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 SH3BP2P78314 561 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 TDGQ13569 410 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 PTPRRQ15256 657 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 ANKRD54Q6NXT1 300 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 ACBD4Q8NC06 268 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 CHDHQ8NE62 594 aaPredicted RBP17.51■□□□□ 0.39
VARS2-209ENST00000477288 OR9Q2Q8NGE9 314 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 OR2B2Q9GZK3 357 aa17.51■□□□□ 0.39
VARS2-209ENST00000477288 DCP2Q8IU60 420 aaKnown RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 VWA5B2Q8N398 1253 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SFXN5Q8TD22 340 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 TRMT2BQ96GJ1 504 aaKnown RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 DUSP23Q9BVJ7 150 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 ALG8Q9BVK2 526 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 FOLH1BQ9HBA9 442 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 PLEK2Q9NYT0 353 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 LRP6O75581 1613 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SC5DO75845 299 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 NKX2-5P52952 324 aaPredicted RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 ZNF33BQ06732 778 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SMAD2Q15796 467 aaKnown RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 KIAA1211LQ6NV74 962 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 OR5W2Q8NH69 310 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 CNTNAP3BQ96NU0 1288 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 NMNAT1Q9HAN9 279 aaPredicted RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 GDE1Q9NZC3 331 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms