RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 BMP7P18075 431 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 CHI3L1P36222 383 aaPredicted RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 ARFIP2P53365 341 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 ADORA2A-AS1P86434 159 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 CRYZQ08257 329 aaKnown RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 MAPK11Q15759 364 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 ARHGAP11BQ3KRB8 267 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 FLYWCH1Q4VC44 716 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 C6orf10Q5SRN2 563 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 RTL6Q6ICC9 239 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 HEPHL1Q6MZM0 1159 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 YTHDF3Q7Z739 585 aaKnown RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 HMGN2P46Q86SG4 172 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 MSRB3Q8IXL7 192 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 OR5M1Q8NGP8 315 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 SSC4DQ8WTU2 575 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 ZG16BQ96DA0 208 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 SPDL1Q96EA4 605 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 ITCHQ96J02 903 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 TIMP4Q99727 224 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 NPAS1Q99742 590 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 SIKE1Q9BRV8 207 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 G6PC3Q9BUM1 346 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 TBL1XR1Q9BZK7 514 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 OR2B2Q9GZK3 357 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 PAIP1Q9H074 479 aaKnown RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 SLC25A37Q9NYZ2 338 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 RPH3AQ9Y2J0 694 aaPredicted RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 MEMO1Q9Y316 297 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 PCDHB14Q9Y5E9 798 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 KIAA1549Q9HCM3 1950 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 IGLV3-32A0A0A0MS00 114 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 C15orf38-AP3S2A0A0A6YYH1 394 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 A0A1B0GUH1 482 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 OR14I1A6ND48 311 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 DUXAA6NLW8 204 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 SHISA8B8ZZ34 492 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 NDUFB5O43674 189 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TNFRSF21O75509 655 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 UGT2B17O75795 530 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ANP32DO95626 131 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ZCCHC18P0CG32 403 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TROVE2P10155 538 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC3-208ENST00000476739 ATP6V1C1P21283 382 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 DPP4P27487 766 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 SRD5A2P31213 254 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 DCTP40126 519 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 STARP49675 285 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 CLK3P49761 638 aaKnown RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 KHKP50053 298 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 SEC24CP53992 1094 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 B3GALT5-AS1P59052 145 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 C17orf67Q0P5P2 114 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 LRRC74AQ0VAA2 488 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 CDSNQ15517 529 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 GPR68Q15743 365 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 MAPK14Q16539 360 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 SYPL1Q16563 259 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
HDAC3-208ENST00000476739 NDUFAF6Q330K2 333 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 KLHL26Q53HC5 615 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 AP1ARQ63HQ0 302 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 ZNF585AQ6P3V2 769 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ARSKQ6UWY0 536 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 FRRS1Q6ZNA5 592 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 MSANTD1Q6ZTZ1 278 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 RETREG3Q86VR2 466 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 LSRQ86X29 649 aaPredicted RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 C10orf111Q8N326 155 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TRIML2Q8N7C3 387 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ANKFN1Q8N957 763 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 OR4K17Q8NGC6 315 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 OR14L1PQ8NHC6 308 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 C10orf82Q8WW14 230 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 SARAFQ96BY9 339 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ZNF524Q96C55 264 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ROPN1LQ96C74 230 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ARSGQ96EG1 525 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 UGT2B28Q9BY64 529 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ZNF350Q9GZX5 532 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 QRSL1Q9H0R6 528 aaKnown RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 RUBCNLQ9H714 662 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 RMND5AQ9H871 391 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TPT1P8Q9HAU6 139 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 UBQLN4Q9NRR5 601 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 TAS2R10Q9NYW0 307 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 VAPAQ9P0L0 249 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 MKLN1Q9UL63 735 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 PCDHGB3Q9Y5G1 929 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 FAM215AQ9Y5M1 114 aa8.8□□□□□ -1
HDAC3-208ENST00000476739 NCOA6Q14686 2063 aaPredicted RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
HDAC3-208ENST00000476739 FLNCQ14315 2725 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 PCNX1Q96RV3 2341 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 A0A096LPI6 279 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 TRBV5-3A0A0A0MS03 114 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 A0A1W2PP18 115 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms