RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PRAMEF12O95522 483 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CYB5R3P00387 301 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 RHOP08100 348 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CYC1P08574 325 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SLC35G4P0C7Q5 338 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 PRR23D2P0DMB1 279 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 C1GALT1C1LP0DN25 315 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 NME1P15531 152 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 CXCL3P19876 107 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 PTPN3P26045 913 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CERS1P27544 350 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 NDUFS1P28331 727 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 GRNP28799 593 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 LSSP48449 732 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 EVX1P49640 407 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 AGFG1P52594 562 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 SELENOVP59797 346 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR2B8PP59922 312 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CXADRP78310 365 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CHRNB3Q05901 458 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 FOXM1Q08050 763 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CNTN1Q12860 1018 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 LCP2Q13094 533 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 GPR176Q14439 515 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ISXQ2M1V0 245 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 FAM83EQ2M2I3 478 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 DEFB115Q30KQ5 88 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 AGKQ53H12 422 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ZRANB3Q5FWF4 1079 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 BCL2L15Q5TBC7 163 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR8G2PQ6IF36 304 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 H3F3CQ6NXT2 135 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CNKSR3Q6P9H4 555 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 VWA1Q6PCB0 445 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 TRAT1Q6PIZ9 186 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 LANCL3Q6ZV70 420 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ARMCX2Q7L311 632 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 BHLHA15Q7RTS1 189 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 PROSER1Q86XN7 944 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 IGDCC3Q8IVU1 814 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 FOXRED2Q8IWF2 684 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 PELI3Q8N2H9 469 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR8J3Q8NGG0 315 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR52N4Q8NGI2 321 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR10K1Q8NGX5 313 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 TERB2Q8NHR7 220 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SPPL2BQ8TCT7 592 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CD300LFQ8TDQ1 290 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 LCN9Q8WX39 176 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CNOT9Q92600 299 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 HIST1H2BAQ96A08 127 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 TCTN2Q96GX1 697 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 MSLNLQ96KJ4 702 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ZNF48Q96MX3 618 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 ZNF382Q96SR6 550 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ATP6V0BQ99437 205 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CNN2Q99439 309 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 RAD9AQ99638 391 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CGRRF1Q99675 332 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 GLIS2Q9BZE0 524 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 HAPLN2Q9GZV7 340 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 MFFQ9GZY8 342 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 LRRN3Q9H3W5 708 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 FKRPQ9H9S5 495 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ABCB9Q9NP78 766 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 DCP1AQ9NPI6 582 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 NCDNQ9UBB6 729 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SAE1Q9UBE0 346 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 ZNF629Q9UEG4 869 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 KCND3Q9UK17 655 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ACSL6Q9UKU0 697 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 NIP7Q9Y221 180 aaKnown RBP eCLIP3.89□□□□□ -1.79
CD55-208ENST00000476590 SLC35A3Q9Y2D2 325 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SLC9A8Q9Y2E8 581 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 hCG_1809904A0A1W2PP81 198 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PPE2 198 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PR64 198 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 TRAPPC13A5PLN9 417 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 MEIS3P2A8K0S8 358 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CXorf49A8MYA2 514 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 G3V3Q6 166 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 H7BY64 318 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
CD55-208ENST00000476590 ADAM20O43506 726 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 GMFGO60234 142 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SC5DO75845 299 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ONECUT2O95948 504 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 IL1AP01583 271 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 PMP2P02689 132 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 MT-ND1P03886 318 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 F13BP05160 661 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 C8GP07360 202 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CSH1P0DML2 217 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CSH2P0DML3 217 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 RAP2AP10114 183 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 TYRP14679 529 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CXCL2P19875 107 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 NFYAP23511 347 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 GABRR1P24046 479 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms