RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 F10P00742 488 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 TBXA2RP21731 343 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 LIM2P55344 173 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 NTHL1P78549 312 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 PUDPQ08623 228 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 ZNF154Q13106 437 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 EIPR1Q53HC9 387 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 DCST2Q5T1A1 773 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 IFNEQ86WN2 208 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 TMEM17Q86X19 198 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.55□□□□□ -1.68
VPS50-212ENST00000476413 OR9A4Q8NGU2 314 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 CNIH3Q8TBE1 160 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 SLC5A11Q8WWX8 675 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 TTC25Q96NG3 672 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 FOXN4Q96NZ1 517 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 ZNF607Q96SK3 696 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 SNX6Q9UNH7 406 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 OR10H1Q9Y4A9 318 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 MAB21L2Q9Y586 359 aa4.55□□□□□ -1.68
VPS50-212ENST00000476413 CFAP65Q6ZU64 1925 aaKnown RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 GSAPA4D1B5 854 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 SAGE2PA6NJ88 616 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 CDX4O14627 284 aaPredicted RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 TRIM3O75382 744 aaPredicted RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 RHBDL1O75783 438 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 TBX6O95947 436 aaPredicted RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 HBQ1P09105 142 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 PDHBP11177 359 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 PTBP1P26599 531 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS50-212ENST00000476413 IL2RGP31785 369 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 RND3P61587 244 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 RGS1Q08116 209 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 TGIF1Q15583 401 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 TATDN3Q17R31 274 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 TIGITQ495A1 244 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 CCDC152Q4G0S7 254 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 ACSM5Q6NUN0 579 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 UFSP1Q6NVU6 142 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 BLOC1S2Q6QNY1 142 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 MYPOPQ86VE0 399 aaPredicted RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 LRRC43Q8N309 656 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 ZSCAN4Q8NAM6 433 aaPredicted RBP4.54□□□□□ -1.68
VPS50-212ENST00000476413 STEAP2Q8NFT2 490 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 OR2L2Q8NH16 312 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 VN1R17PQ8TDU5 208 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 TMEM80Q96HE8 168 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 PPP1R16AQ96I34 528 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 APOL2Q9BQE5 337 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 ELOVL3Q9HB03 270 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 SENP1Q9P0U3 644 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 L3MBTL1Q9Y468 752 aa4.54□□□□□ -1.68
VPS50-212ENST00000476413 MBLAC1A4D2B0 266 aaPredicted RBP4.53□□□□□ -1.68
VPS50-212ENST00000476413 EFCAB7A8K855 629 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 GMFGO60234 142 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 UGT2B4P06133 528 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 PPT1P50897 306 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 PLA2G16P53816 162 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 UBE2HP62256 183 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 ATAD3BQ5T9A4 648 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 MEDAGQ5VYS4 303 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 TTC23Q5W5X9 447 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 KIAA1328Q86T90 577 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 AGAP11Q8TF27 550 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 GTSF1Q8WW33 167 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 MYLPFQ96A32 169 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 UBXN6Q9BZV1 441 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 GORASP2Q9H8Y8 452 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 SMPD3Q9NY59 655 aaPredicted RBP4.53□□□□□ -1.68
VPS50-212ENST00000476413 CRLS1Q9UJA2 301 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 MRPS33Q9Y291 106 aaKnown RBP4.53□□□□□ -1.68
VPS50-212ENST00000476413 POGZQ7Z3K3 1410 aa4.53□□□□□ -1.68
VPS50-212ENST00000476413 IGHV3-35A0A0C4DH35 117 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 A8MX80 341 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 BTN3A3O00478 584 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 MAGEB3O15480 346 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 GPRIN2O60269 458 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 KIAA0754O94854 1291 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 PGCP20142 388 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 HNF1AP20823 631 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 IGHV1-2P23083 117 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 ATP5A1P25705 553 aaKnown RBP4.52□□□□□ -1.69
VPS50-212ENST00000476413 CHI3L1P36222 383 aaPredicted RBP4.52□□□□□ -1.69
VPS50-212ENST00000476413 PTGER3P43115 390 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 GBX2P52951 348 aaPredicted RBP4.52□□□□□ -1.69
VPS50-212ENST00000476413 CXCL6P80162 114 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 CBX1P83916 185 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SPIBQ01892 262 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 BDH1Q02338 343 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 ST3GAL3Q11203 375 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 CHIT1Q13231 466 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 GPM6BQ13491 265 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SYPL1Q16563 259 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SLC5A12Q1EHB4 618 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 GGTA1PQ4G0N0 100 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 HIGD2BQ4VC39 106 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 RNLSQ5VYX0 342 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 CGB2Q6NT52 195 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SCYL2Q6P3W7 929 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms