RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OTOGLQ3ZCN5 2332 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 NOTCH3Q9UM47 2321 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ELOA3DA6NLF2 546 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 WASH4PA8MWX3 477 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 H0YJX3 145 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 DSCR3O14972 297 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ABLIM3O94929 683 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TFPIP10646 304 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ADRB3P13945 408 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PPIBP23284 216 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 GIPRP48546 466 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PRR5P85299 388 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 KRR1Q13601 381 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 MRPL58Q14197 206 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF234Q14588 700 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 NTRK2Q16620 822 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ELOA3BQ3SY89 546 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 C4orf46Q504U0 113 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 AFMIDQ63HM1 303 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ANKRD54Q6NXT1 300 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ALKAL2Q6UX46 152 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PRICKLE2Q7Z3G6 844 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SLC46A3Q7Z3Q1 461 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 KLHL36Q8N4N3 616 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ELOA3Q8NG57 546 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ASB15Q8WXK1 588 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ACOT12Q8WYK0 555 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 DVL3Q92997 716 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 CPNE2Q96FN4 548 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 AGAP4Q96P64 663 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TXNL4BQ9NX01 149 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 MARK1Q9P0L2 795 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ANKMY1Q9P2S6 941 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OSGIN1Q9UJX0 560 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 NCKAP1Q9Y2A7 1128 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 GPR55Q9Y2T6 319 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ALG5Q9Y673 324 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ABCA1O95477 2261 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 RIIAD1A6NNX1 92 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 IDSB3KWA1 339 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ARPC5O15511 151 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 LYRM1O43325 122 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 GPR37L1O60883 481 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SPDEFO95238 335 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 CPNE6O95741 557 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 RAB36O95755 333 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ADH1CP00326 375 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 YES1P07947 543 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF888P0CJ79 500 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 GLI4P10075 376 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 VAMP1P23763 118 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 MPIP34949 423 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TRIM23P36406 574 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 CXCR4P61073 352 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 LARS2Q15031 903 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF630Q2M218 657 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TRMT12Q53H54 448 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 C1orf189Q5VU69 101 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 LIPJQ5W064 366 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SLCO4C1Q6ZQN7 724 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 RTL4Q6ZR62 310 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SLC35D2Q76EJ3 337 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PEX5LQ8IYB4 626 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 POGLUT1Q8NBL1 392 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OR8J1Q8NGP2 316 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OR6N2Q8NGY6 317 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FIBINQ8TAL6 211 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FANK1Q8TC84 345 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PHOSPHO1Q8TCT1 267 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HLA-CQ95604 372 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ARRDC3Q96B67 414 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 C4orf36Q96KX1 117 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HSPA12BQ96MM6 686 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 MAPKAP1Q9BPZ7 522 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM175Q9BSA9 504 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 YTHDF1Q9BYJ9 559 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SLC35C2Q9NQQ7 365 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 RABL2AQ9UBK7 228 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 MED31Q9Y3C7 131 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ADAM18Q9Y3Q7 739 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PCDHGA4Q9Y5G9 962 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 A0A1B0GTH9 108 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ANKRD34BA5PLL1 514 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FABP7O15540 132 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ORC5O43913 435 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 NUAK1O60285 661 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TSPAN9O75954 239 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 GPANK1O95872 356 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 DHFRP00374 187 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HPRP00739 348 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FURINP09958 794 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SLC35G6P0C7Q6 338 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OSMP13725 252 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 RHCEP18577 417 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HK1P19367 917 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ELAVL4P26378 380 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PTPN6P29350 595 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TLX1P31314 330 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms