RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 VDAC3Q9Y277 283 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 A0A087WZY1 265 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 EIF1AYO14602 144 aaKnown RBP11.73□□□□□ -0.53
MRPL55-228ENST00000476267 DSCAMO60469 2012 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 GLRA3O75311 464 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 KCNH1O95259 989 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 ACP2P11117 423 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 PRPS2P11908 318 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 PPP3CBP16298 524 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 EIF1AXP47813 144 aaKnown RBP11.73□□□□□ -0.53
MRPL55-228ENST00000476267 RFX3P48380 749 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 DNAJB13P59910 316 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 HSPB3Q12988 150 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 PDE7AQ13946 482 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 IMPG1Q17R60 797 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 FAM153CQ494X1 144 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 ANKRD26P1Q6NSI1 321 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 Q6ZSR9 355 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 GALNT10Q86SR1 603 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 OR2T11Q8NH01 316 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 ACTRT2Q8TDY3 377 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 NUDT8Q8WV74 236 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 SLC9A6Q92581 669 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 CIDECQ96AQ7 238 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-228ENST00000476267 KLHL4Q9C0H6 718 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 OR10A4Q9H209 315 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 C3orf14Q9HBI5 128 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 FBXO34Q9NWN3 711 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 CLEC4AQ9UMR7 237 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 EMC9Q9Y3B6 208 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 PTGDR2Q9Y5Y4 395 aa11.73□□□□□ -0.53
MRPL55-228ENST00000476267 A0A0J9YW62 118 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 A0A1W2PRB8 838 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-228ENST00000476267 PDPK1O15530 556 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 GMFGO60234 142 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 PLIN3O60664 434 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 SOX30O94993 753 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 KCNK2O95069 426 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 PLAUP00749 431 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 UROSP10746 265 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 MYL2P10916 166 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 SDC1P18827 310 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 RAC1P63000 192 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 SLC18A2Q05940 514 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF844Q08AG5 666 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 SGCBQ16585 318 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 EXOC3L2Q2M3D2 409 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 CLEC6AQ6EIG7 209 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 MFSD12Q6NUT3 480 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF704Q6ZNC4 412 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-228ENST00000476267 PLEKHM3Q6ZWE6 761 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
MRPL55-228ENST00000476267 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 MNS1Q8NEH6 495 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 CCT7Q99832 543 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 TUBB1Q9H4B7 451 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 EQTNQ9NQ60 294 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 RRAGDQ9NQL2 400 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-228ENST00000476267 MED17Q9NVC6 651 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 OXSMQ9NWU1 459 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 C1orf109Q9NX04 203 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 PAQR5Q9NXK6 330 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-228ENST00000476267 TBK1Q9UHD2 729 aa11.72□□□□□ -0.53
MRPL55-228ENST00000476267 FBN1P35555 2871 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 A0A1W2PQD3 144 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 NDUFB5O43674 189 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CXCL13O43927 109 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 TMCC2O75069 709 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 SEC22BO75396 215 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 GCM2O75603 506 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CNOT4O95628 575 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 LINGO3P0C6S8 592 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 AGTR1P30556 359 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CD226Q15762 336 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 DUSP5Q16690 384 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CCDC153Q494R4 210 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 RFTN2Q52LD8 501 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CPTPQ5TA50 214 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 ESPNLQ6ZVH7 1005 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 CNPY4Q8N129 248 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 NUP43Q8NFH3 380 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 OR2V1Q8NHB1 315 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 RNF145Q96MT1 663 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 MS4A4EQ96PG1 132 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 MDFIQ99750 246 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 C12orf65Q9H3J6 166 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 REEP4Q9H6H4 257 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 GLRX2Q9NS18 164 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 SIRT3Q9NTG7 399 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms