RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 EPHA3P29320 983 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 SOAT1P35610 550 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 C17orf67Q0P5P2 114 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 GANABQ14697 944 aaKnown RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 SF3B4Q15427 424 aaKnown RBP eCLIP19.15■□□□□ 0.667e-24■■■■□ 26
LIME1-204ENST00000476183 SLC25A35Q3KQZ1 300 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 GDF7Q7Z4P5 450 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 ANKRD46Q86W74 232 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 GATSQ8NAP1 163 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 OR5M1Q8NGP8 315 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 MBD3L2Q8NHZ7 208 aaPredicted RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 TESCQ96BS2 214 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 MOAP1Q96BY2 351 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 TEX37Q96LM6 180 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 SERHL2Q9H4I8 314 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 FAF1Q9UNN5 650 aaPredicted RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 MED12LQ86YW9 2145 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 PDZD2O15018 2839 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 IL2RAP01589 272 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 BMP5P22003 454 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 LCN1P31025 176 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 DLX5P56178 289 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 NME5P56597 212 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 RPS26P62854 115 aaKnown RBP19.14■□□□□ 0.65
LIME1-204ENST00000476183 RCAN2Q14206 197 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 SPANXN4Q5MJ08 99 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 RAET1LQ5VY80 246 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 ARSKQ6UWY0 536 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 MAVSQ7Z434 540 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 DMRTC2Q8IXT2 367 aaPredicted RBP19.14■□□□□ 0.65
LIME1-204ENST00000476183 OR5D16Q8NGK9 328 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 ADAMTS15Q8TE58 950 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 OR7D2Q96RA2 312 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 KLHDC3Q9BQ90 382 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 PTGES2Q9H7Z7 377 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 UBQLN4Q9NRR5 601 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 AIG1Q9NVV5 245 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 ZNF337Q9Y3M9 751 aa19.14■□□□□ 0.65
LIME1-204ENST00000476183 ANKHD1Q8IWZ3 2542 aaKnown RBP19.13■□□□□ 0.65
LIME1-204ENST00000476183 NPIPA5A0A0B4J1W7 369 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 OR2M5A3KFT3 312 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 CLCA1A8K7I4 914 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 SHISA8B8ZZ34 492 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 NPIPA7E9PJI5 369 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 NDUFB5O43674 189 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 NPIPA8P0DM63 369 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 IL12AP29459 219 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 CLDN15P56746 228 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 UFM1P61960 85 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 CD226Q15762 336 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 TTMPQ5BVD1 217 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 DCST2Q5T1A1 773 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 C6orf120Q7Z4R8 191 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 OR4A15Q8NGL6 344 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 ZNF75CPQ92670 426 aaPredicted RBP19.13■□□□□ 0.65
LIME1-204ENST00000476183 UCN2Q96RP3 112 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 CLCF1Q9UBD9 225 aa19.13■□□□□ 0.65
LIME1-204ENST00000476183 RNF103-CHMP3A0A140T963 221 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 PRSS51A0A1B0GVH4 220 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 TRPC5OSA6NMA1 111 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 C9JVG2 144 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 H0YC42 278 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 DVL2O14641 736 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 KLF11O14901 512 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 KRT16P08779 473 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 AGFG1P52594 562 aaKnown RBP19.12■□□□□ 0.65
LIME1-204ENST00000476183 CLNS1AP54105 237 aaKnown RBP19.12■□□□□ 0.65
LIME1-204ENST00000476183 TPD52P55327 224 aaPredicted RBP19.12■□□□□ 0.65
LIME1-204ENST00000476183 BCL2A1Q16548 175 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 TMEM44Q2T9K0 475 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 FAM174BQ3ZCQ3 159 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 SLC9B1Q4ZJI4 515 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 SPATA19Q7Z5L4 167 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 NPAS1Q99742 590 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 ZNF629Q9UEG4 869 aaPredicted RBP19.12■□□□□ 0.65
LIME1-204ENST00000476183 GPR45Q9Y5Y3 372 aa19.12■□□□□ 0.65
LIME1-204ENST00000476183 E9PBE3 544 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 SCDO00767 359 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 ZNF195O14628 629 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 CPSF4O95639 269 aaKnown RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 PEPDP12955 493 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 POU3F2P20265 443 aaPredicted RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 MATN1P21941 496 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 RNF144AP50876 292 aaPredicted RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 SUCLG1P53597 346 aaKnown RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 FOXF2Q12947 444 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 GLYR1Q49A26 553 aaPredicted RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.11■□□□□ 0.65
LIME1-204ENST00000476183 ANXA8L1Q5VT79 327 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 BHLHB9Q6PI77 547 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 UBQLNLQ8IYU4 475 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 SH3YL1Q96HL8 342 aaPredicted RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 MAELQ96JY0 434 aaKnown RBP19.11■□□□□ 0.65
LIME1-204ENST00000476183 ATP6V1G3Q96LB4 118 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 PIGQQ9BRB3 760 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 VDAC3Q9Y277 283 aa19.11■□□□□ 0.65
LIME1-204ENST00000476183 A0A1W2PQD3 144 aa19.1■□□□□ 0.65
LIME1-204ENST00000476183 NPIPB9F8W1W9 429 aa19.1■□□□□ 0.65
LIME1-204ENST00000476183 SLCO1B7G3V0H7 640 aa19.1■□□□□ 0.65
LIME1-204ENST00000476183 OIP5O43482 229 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms