RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 OR4K17Q8NGC6 315 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 SPATA3Q8NHX4 192 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.35□□□□□ -0.91
CALD1-217ENST00000475772 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 MTBPQ96DY7 904 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 MRPL57Q9BQC6 102 aaKnown RBP9.35□□□□□ -0.91
CALD1-217ENST00000475772 SLC39A3Q9BRY0 314 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 ACPTQ9BZG2 426 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 RAB17Q9H0T7 212 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 GRPEL1Q9HAV7 217 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 ZNF701Q9NV72 531 aaPredicted RBP9.35□□□□□ -0.91
CALD1-217ENST00000475772 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
CALD1-217ENST00000475772 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 MYO1GB0I1T2 1018 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 H3BML4 177 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 UPK1AO00322 258 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 SEC14L5O43304 696 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 PCDH7O60245 1069 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 PSMG1O95456 288 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 ESRRBO95718 433 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 F13BP05160 661 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 HSD3B1P14060 373 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 IL11P20809 199 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 HSD3B2P26439 372 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 NTF4P34130 210 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 KCNJ5P48544 419 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 NR1H2P55055 460 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 OCRLQ01968 901 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.34□□□□□ -0.91
CALD1-217ENST00000475772 ZNF678Q5SXM1 525 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 RAET1LQ5VY80 246 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 STAC2Q6ZMT1 411 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 PLEKHM3Q6ZWE6 761 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 CHMP1BQ7LBR1 199 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 ZNF572Q7Z3I7 529 aaPredicted RBP9.34□□□□□ -0.91
CALD1-217ENST00000475772 ZAR1Q86SH2 424 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 MARCH3Q86UD3 253 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 GGNQ86UU5 652 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 RELL1Q8IUW5 271 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
CALD1-217ENST00000475772 DCAKDQ8WVC6 231 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 C1GALT1C1Q96EU7 318 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 KLHDC3Q9BQ90 382 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 TMEM204Q9BSN7 226 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 KLHL4Q9C0H6 718 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
CALD1-217ENST00000475772 PFDN4Q9NQP4 134 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 NMRK1Q9NWW6 199 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 SIRT5Q9NXA8 310 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 TAS2R9Q9NYW1 312 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 TMEM216Q9P0N5 145 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 PROCRQ9UNN8 238 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 C19orf53Q9UNZ5 99 aaPredicted RBP9.34□□□□□ -0.91
CALD1-217ENST00000475772 ZNF175Q9Y473 711 aa9.34□□□□□ -0.91
CALD1-217ENST00000475772 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 A0A087WV62 115 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 DLX3O60479 287 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 CRLF1O75462 422 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 SUPT7LO94864 414 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 IL33O95760 270 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 IGKV1D-16P01601 117 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 TIA1P31483 386 aaKnown RBP eCLIP9.33□□□□□ -0.92
CALD1-217ENST00000475772 KRT20P35900 424 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 EEFSECP57772 596 aaKnown RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 BTKQ06187 659 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 CSTF3Q12996 717 aaKnown RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 STX5Q13190 355 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 TNK1Q13470 666 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 TSNAXIP1Q2TAA8 658 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 CTU2Q2VPK5 515 aaKnown RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 GLYR1Q49A26 553 aaPredicted RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 CYP27C1Q4G0S4 372 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 SH2D4BQ5SQS7 431 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 GALNT18Q6P9A2 607 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 ADGRG7Q96K78 797 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 KCNA7Q96RP8 456 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 PAFAH2Q99487 392 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 EBPLQ9BY08 206 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 STMN4Q9H169 189 aaPredicted RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 CDC42EP4Q9H3Q1 356 aaKnown RBP9.33□□□□□ -0.92
CALD1-217ENST00000475772 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 CLEC4AQ9UMR7 237 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 OR10H1Q9Y4A9 318 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 TIMM22Q9Y584 194 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 AP4B1Q9Y6B7 739 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 SVEP1Q4LDE5 3571 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 PLCE1Q9P212 2302 aa9.33□□□□□ -0.92
CALD1-217ENST00000475772 IGLV3-32A0A0A0MS00 114 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 GXYLT2A0PJZ3 443 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 TRIM49D1C9J1S8 452 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 ULK1O75385 1050 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 OPN1LWP04000 364 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 JUNP05412 331 aaKnown RBP9.32□□□□□ -0.92
CALD1-217ENST00000475772 DDCP20711 480 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 PSMA4P25789 261 aaKnown RBP9.32□□□□□ -0.92
CALD1-217ENST00000475772 GCAP28676 217 aa9.32□□□□□ -0.92
CALD1-217ENST00000475772 MPIP34949 423 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms