RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
UBXN11-214ENST00000475591 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
UBXN11-214ENST00000475591 MMP17Q9ULZ9 603 aa13.1□□□□□ -0.31
UBXN11-214ENST00000475591 CLCA2Q9UQC9 943 aa13.1□□□□□ -0.31
UBXN11-214ENST00000475591 A0A0C4DFX4 3053 aa13.1□□□□□ -0.31
UBXN11-214ENST00000475591 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 GPR75O95800 540 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 AGR2O95994 175 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ATP1B1P05026 303 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ZGLP1P0C6A0 271 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ZNF10P21506 573 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 STAT5AP42229 794 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 MADCAM1Q13477 382 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 CCINQ13939 588 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 AADACL4Q5VUY2 407 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 SMRP1Q8NCR6 262 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ASB15Q8WXK1 588 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 NR4A3Q92570 626 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 TOE1Q96GM8 510 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 MED20Q9H944 212 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ISPDA4D126 451 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 OR2W5A6NFC9 320 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 STX11O75558 287 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 MAKP20794 623 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 GABRA3P34903 492 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 OSTF1Q92882 214 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 HPS1Q92902 700 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 ANKRD9Q96BM1 317 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 SLC30A2Q9BRI3 323 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 CACYBPQ9HB71 228 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
UBXN11-214ENST00000475591 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
UBXN11-214ENST00000475591 A0A075B6Q4 140 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 LOC110117498-PIK3R3F6TDL0 507 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CDC123O75794 336 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 THEGLP0DJG4 465 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 AZGP1P25311 298 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 ETV6P41212 452 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 RABIFP47224 123 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 GCGRP47871 477 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CAV3P56539 151 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 FZD2Q14332 565 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 INSL4Q14641 139 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 ZNF791Q3KP31 576 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SLC35F1Q5T1Q4 408 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SMARCD3Q6STE5 483 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 GDPGP1Q6ZNW5 385 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SPATC1Q76KD6 591 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 RLN3Q8WXF3 142 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 C1GALT1C1Q96EU7 318 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 GPR174Q9BXC1 333 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 UGT2A1Q9Y4X1 527 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 HS3ST3A1Q9Y663 406 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 B4DGG1 531 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 HRKO00198 91 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 AQP9O43315 295 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 PLOD3O60568 738 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 NID1P14543 1247 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SLC1A3P43003 542 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 RORCP51449 518 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 HHEXQ03014 270 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 HNRNPA0Q13151 305 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 ZNF614Q8N883 585 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 AVL9Q8NBF6 648 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 GSDMCQ9BYG8 508 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 UBQLN3Q9H347 655 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SP140LQ9H930 580 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 MUTYHQ9UIF7 546 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 SF3B6Q9Y3B4 125 aaKnown RBP13.08□□□□□ -0.32
UBXN11-214ENST00000475591 CDH10Q9Y6N8 788 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 V9GYH0 126 aa13.08□□□□□ -0.32
UBXN11-214ENST00000475591 TMEM129A0AVI4 362 aa13.07□□□□□ -0.32
UBXN11-214ENST00000475591 LYPD3O95274 346 aa13.07□□□□□ -0.32
UBXN11-214ENST00000475591 CBX7O95931 251 aa13.07□□□□□ -0.32
UBXN11-214ENST00000475591 THBS1P07996 1170 aa13.07□□□□□ -0.32
UBXN11-214ENST00000475591 SDC2P34741 201 aa13.07□□□□□ -0.32
UBXN11-214ENST00000475591 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms