RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC17A7Q9P2U7 560 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 NDRG3Q9UGV2 375 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 FIS1Q9Y3D6 152 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF175Q9Y473 711 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 AP4B1Q9Y6B7 739 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 KCNE3Q9Y6H6 103 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ABCA4P78363 2273 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 A0A0J9YW62 118 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 A0A1W2PRB8 838 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 C16orf97H3BN30 126 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 H3BQF6 201 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 KIF2AO00139 706 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 SLC28A1O00337 649 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 COPEO14579 308 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CASKO14936 926 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 KLF4O43474 513 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OIP5O43482 229 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 RGS14O43566 566 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 TRIM13O60858 407 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CRCPO75575 148 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 GOSR1O95249 250 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 KCNH1O95259 989 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NTN1O95631 604 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OXSR1O95747 527 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NGFRP08138 427 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CREB1P16220 341 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CRYGSP22914 178 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 SHC1P29353 583 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 RNF144AP50876 292 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 DIO3P55073 304 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 MANFP55145 182 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 EEFSECP57772 596 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 RPL38P63173 70 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NKX6-1P78426 367 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OCRLQ01968 901 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 ZNHIT3Q15649 155 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CPTPQ5TA50 214 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OR2A2Q6IF42 318 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 MFSD12Q6NUT3 480 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CBLN3Q6UW01 205 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 FAM214BQ7L5A3 538 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CHMP1BQ7LBR1 199 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 P4HA3Q7Z4N8 544 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 GTPBP8Q8N3Z3 284 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CDRT4Q8N9R6 151 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CCDC63Q8NA47 563 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 GATSQ8NAP1 163 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NUP43Q8NFH3 380 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OR7A2PQ8NGA2 310 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OR6Y1Q8NGX8 325 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 OR10D3Q8NH80 312 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 UBLCP1Q8WVY7 318 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 IGFBPL1Q8WX77 278 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 PPCDCQ96CD2 204 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 FAM120BQ96EK7 910 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 ZC3HAV1LQ96H79 300 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 FAM111AQ96PZ2 611 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 MECRQ9BV79 373 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 TBL1XR1Q9BZK7 514 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 PTGES2Q9H7Z7 377 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 ANKZF1Q9H8Y5 726 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 L2HGDHQ9H9P8 463 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NEUROD4Q9HD90 331 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 ACSS1Q9NUB1 689 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 MED17Q9NVC6 651 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 BEX4Q9NWD9 120 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 ELOVL5Q9NYP7 299 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 MRTO4Q9UKD2 239 aaKnown RBP6.29□□□□□ -1.4
HDAC3-207ENST00000475549 CLEC4AQ9UMR7 237 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 EDARQ9UNE0 448 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 VDAC3Q9Y277 283 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 TRAF6Q9Y4K3 522 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 NAV3Q8IVL0 2385 aa6.29□□□□□ -1.4
HDAC3-207ENST00000475549 FREM3P0C091 2139 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 C7orf72A4D263 438 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TTC36A6NLP5 189 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 NPIPB9F8W1W9 429 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 EIF1AYO14602 144 aaKnown RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TNFSF11O14788 317 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PIP5K1BO14986 540 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 NDUFB5O43674 189 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 SS18L1O75177 396 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PLAUP00749 431 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 HMGN2P05204 90 aaKnown RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 POU2F1P14859 743 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF17P17021 662 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 GPC1P35052 558 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 EIF1AXP47813 144 aaKnown RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PRIM2P49643 509 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PSMD4P55036 377 aaKnown RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 RAC1P63000 192 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PTGR1Q14914 329 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 MLC1Q15049 377 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TOMM34Q15785 309 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ACKR1Q16570 336 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 SGCBQ16585 318 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PLPPR5Q32ZL2 321 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 GALNTL6Q49A17 601 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms