RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 USP17L7P0C7H9 530 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MPC1LP0DKB6 136 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PPIBP23284 216 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 NFYAP23511 347 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 PSMA1P25786 263 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 BACE1P56817 501 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ERVFC1P60507 584 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PSG6Q00889 435 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ZNF85Q03923 595 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ERV3-1Q14264 604 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RTP2Q5QGT7 225 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ACER2Q5QJU3 275 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PRAMEF19Q5SWL8 479 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SLC22A10Q63ZE4 541 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 C22orf42Q6IC83 251 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GPR153Q6NV75 609 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 NOXRED1Q6NXP6 359 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PLET1Q6UQ28 207 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 LYPD4Q6UWN0 246 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 FAM131AQ6UXB0 335 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RBMS3Q6XE24 437 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 FAM83HQ6ZRV2 1179 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 KANSL1Q7Z3B3 1105 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ZNF467Q7Z7K2 595 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 LRRTM1Q86UE6 522 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 LGI4Q8N135 537 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR4K15Q8NH41 348 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 LRRC46Q96FV0 321 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 COQ10AQ96MF6 247 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CDK15Q96Q40 435 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TMED9Q9BVK6 235 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DPCDQ9BVM2 203 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 SLC12A9Q9BXP2 914 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 NMNAT2Q9BZQ4 307 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SLC6A20Q9NP91 592 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SEMA4BQ9NPR2 832 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 INPP5EQ9NRR6 644 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 COQ3Q9NZJ6 369 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DHCR7Q9UBM7 475 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 LHX3Q9UBR4 397 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SPATA2Q9UM82 520 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MOKQ9UQ07 419 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TNRC6AQ8NDV7 1962 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 TRBV5-7A0A0A0MS05 114 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TRBV5-5A0A0J9YX44 114 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 C9JQL5 133 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SULT1C2O00338 296 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 IMPA2O14732 288 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PDCD5O14737 125 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PIN1P1O15428 100 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ADAM12O43184 909 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GLCEO94923 617 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 IGF2P01344 180 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ALDOBP05062 364 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 KLK3P07288 261 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 HOXB5P09067 269 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CNPP09543 421 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 IFI30P13284 250 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 HOXA5P20719 270 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 NT5EP21589 574 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CHI3L1P36222 383 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 PREPP48147 710 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CYP4F8P98187 520 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 INSL4Q14641 139 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CDK5R1Q15078 307 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 VWA2Q5GFL6 755 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 HENMT1Q5T8I9 393 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 BCL2L15Q5TBC7 163 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DCAF12L2Q5VW00 463 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 FAM160B1Q5W0V3 765 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GCNT7Q6ZNI0 430 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OVCH1Q7RTY7 1134 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR8H3Q8N146 312 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 NAGSQ8N159 534 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 BEND2Q8NDZ0 799 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 AGBL3Q8NEM8 1001 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR8H1Q8NGG4 311 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR5L2Q8NGL0 311 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR13C4Q8NGS5 318 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR8K3Q8NH51 312 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 BRIX1Q8TDN6 353 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 ASB11Q8WXH4 323 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 HIST1H2BAQ96A08 127 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ATG4CQ96DT6 458 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ELP4Q96EB1 424 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR4K3Q96R72 315 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR52E6Q96RD3 313 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PKP4Q99569 1192 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GPR21Q99679 349 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TSSK6Q9BXA6 273 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TM6SF2Q9BZW4 377 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 LMAN1LQ9HAT1 526 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 NMRK2Q9NPI5 230 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SERGEFQ9UGK8 458 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ING4Q9UNL4 249 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SCML2Q9UQR0 700 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ZNF337Q9Y3M9 751 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms