RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RFPL3SP0C7P2 107 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CD46P15529 392 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 TBXA2RP21731 343 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 MST1P26927 711 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CPOXP36551 454 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CPA2P48052 419 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 RFX3P48380 749 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 KHKP50053 298 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 RNF144AP50876 292 aaPredicted RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 NRG3P56975 720 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 MTPNP58546 118 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CHRNEQ04844 493 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 NFYCQ13952 458 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 KRT72Q14CN4 511 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ZNHIT3Q15649 155 aaPredicted RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CD226Q15762 336 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 DECR1Q16698 335 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ARHGAP11BQ3KRB8 267 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 TYW3Q6IPR3 259 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 RPUSD3Q6P087 351 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 FRRS1Q6ZNA5 592 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 NET1Q7Z628 596 aaPredicted RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 HMGN2P46Q86SG4 172 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 MARCH3Q86UD3 253 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CALHM3Q86XJ0 350 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CHERPQ8IWX8 916 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 DND1Q8IYX4 353 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 TRIML2Q8N7C3 387 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 OR2M7Q8NG81 312 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ADAMTS15Q8TE58 950 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ROPN1LQ96C74 230 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 SNRNP40Q96DI7 357 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 TRNT1Q96Q11 434 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 SECISBP2Q96T21 854 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 QRSL1Q9H0R6 528 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 KAT8Q9H7Z6 458 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 SACM1LQ9NTJ5 587 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 RYDENQ9NUL5 291 aaKnown RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 MRGBPQ9NV56 204 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CMTM6Q9NX76 183 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CNIH4Q9P003 139 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ABI3Q9P2A4 366 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 MKLN1Q9UL63 735 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CHST2Q9Y4C5 530 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CACNA1CQ13936 2221 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 FREM1Q5H8C1 2179 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 PRR14LQ5THK1 2151 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 DSPPQ9NZW4 1301 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 PRAMEF25A6NGN4 478 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 DUXAA6NLW8 204 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CCT8L1PA6NM43 557 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CLDN24A6NM45 220 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 BBIP1A8MTZ0 92 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM229AB2RXF0 380 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 NME4O00746 187 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TP53I11O14683 189 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KIAA0513O60268 411 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ADAM11O75078 769 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 DCTN3O75935 186 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 H6PDO95479 791 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ANP32DO95626 131 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 OXSR1O95747 527 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 GUSBP08236 651 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KRT16P08779 473 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CELA3AP09093 270 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ARAFP10398 606 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CNR1P21554 472 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 RPS4Y1P22090 263 aaKnown RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 IL12BP29460 328 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 PRDX6P30041 224 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 EVI2BP34910 448 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CRATP43155 626 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 MAGEA8P43361 318 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TMED10P49755 219 aaKnown RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 MEOX1P50221 254 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TDGF1P3P51864 188 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 CRYBA2P53672 197 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KRTAP10-9P60411 292 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 DSTNP60981 165 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 PSPHP78330 225 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 FADDQ13158 208 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 STX5Q13190 355 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 EFR3AQ14156 821 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 MAPRE2Q15555 327 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF141Q15928 474 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 HYAL4Q2M3T9 481 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KLHL26Q53HC5 615 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 RPS26P11Q5JNZ5 115 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ANGPTL8Q6UXH0 198 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 HACD2Q6Y1H2 254 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 GDF7Q7Z4P5 450 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 COMTD1Q86VU5 262 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 SLC15A3Q8IY34 581 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ZZZ3Q8IYH5 903 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 DNAJB8Q8NHS0 232 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM125Q96AQ2 219 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms