RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ULBP3Q9BZM4 244 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 STRADBQ9C0K7 418 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 TESQ9UGI8 421 aaKnown RBP18.29■□□□□ 0.52
SSR1-204ENST00000474597 NTNG1Q9Y2I2 539 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 FRYLO94915 3013 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 VSTM2BA6NLU5 285 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 SLC5A2P31639 672 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 KRT20P35900 424 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 NUP107P57740 925 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 ESRRGP62508 458 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 E2F1Q01094 437 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 TOP3AQ13472 1001 aaPredicted RBP18.28■□□□□ 0.52
SSR1-204ENST00000474597 EBPQ15125 230 aaKnown RBP18.28■□□□□ 0.52
SSR1-204ENST00000474597 C6orf141Q5SZD1 244 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 GDF7Q7Z4P5 450 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 ADIPOR1Q96A54 375 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 CRB3Q9BUF7 120 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 DGCR6LQ9BY27 220 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 SLC26A1Q9H2B4 701 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 A0A087WXM4 84 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 IGHV3-20A0A0C4DH32 117 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 TRAPPC13A5PLN9 417 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 B4E171 279 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 PRKNO60260 465 aaPredicted RBP18.28■□□□□ 0.52
SSR1-204ENST00000474597 HPGDP15428 266 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 ZNF28P17035 718 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 EEF1B2P24534 225 aaKnown RBP18.28■□□□□ 0.52
SSR1-204ENST00000474597 TSPAN7P41732 249 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 GSSP48637 474 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 APOFQ13790 326 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 FGFBP1Q14512 234 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 GRAMD2AQ8IUY3 354 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 C9orf40Q8IXQ3 194 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 CMIPQ8IY22 773 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 ZNF527Q8NB42 609 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 TOR1AIP2Q8NFQ8 470 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 MR1Q95460 341 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 CDC6Q99741 560 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 WWTR1Q9GZV5 400 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 HOXD1Q9GZZ0 328 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 NXT1Q9UKK6 140 aaKnown RBP18.28■□□□□ 0.52
SSR1-204ENST00000474597 BLOC1S6Q9UL45 172 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 SLC7A7Q9UM01 511 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 TTC28Q96AY4 2481 aa18.28■□□□□ 0.52
SSR1-204ENST00000474597 A0A087WUU8 490 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 NPIPB9F8W1W9 429 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 FMO6PO60774 539 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 RFPL3O75679 317 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 IL33O95760 270 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 OSMP13725 252 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 PRG2P13727 222 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 GGT2P36268 569 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 NR0B1P51843 470 aaKnown RBP18.27■□□□□ 0.52
SSR1-204ENST00000474597 CDK5R2Q13319 367 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 OR1Q1Q15612 314 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 CTU2Q2VPK5 515 aaKnown RBP18.27■□□□□ 0.52
SSR1-204ENST00000474597 ZSCAN1Q8NBB4 408 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 SUMF1Q8NBK3 374 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 CNIH3Q8TBE1 160 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 RNF217Q8TC41 542 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 CNOT9Q92600 299 aaKnown RBP18.27■□□□□ 0.52
SSR1-204ENST00000474597 LRFN5Q96NI6 719 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 LMF1Q96S06 567 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 ZNF559Q9BR84 538 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 TMEM27Q9HBJ8 222 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 C19orf25Q9UFG5 118 aaPredicted RBP18.27■□□□□ 0.52
SSR1-204ENST00000474597 PCDHGA6Q9Y5G7 932 aa18.27■□□□□ 0.52
SSR1-204ENST00000474597 SAGE2PA6NJ88 616 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 C9J4A7 227 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 TMX2-CTNND1H3BSU7 103 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 TNFRSF10AO00220 468 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 POU1F1P28069 291 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 IL12BP29460 328 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 RPL5P46777 297 aaKnown RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 CRISP1P54107 249 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 CDH15P55291 814 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 COX10Q12887 443 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 ILKQ13418 452 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 Q6ZPB1 254 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 ZNF550Q7Z398 422 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 APLFQ8IW19 511 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 PIGXQ8TBF5 258 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 FAM81AQ8TBF8 368 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 ACOT11Q8WXI4 607 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 SPSB2Q99619 263 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 KRCC1Q9NPI7 259 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 UBQLN4Q9NRR5 601 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 TUBA8Q9NY65 449 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 LOXL2Q9Y4K0 774 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 COL27A1Q8IZC6 1860 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 KIF26BQ2KJY2 2108 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 SERINC4A6NH21 518 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 H3BN98 237 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 CBFA2T3O75081 653 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 BCAS1O75363 584 aaPredicted RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 REM1O75628 298 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 ANGPTL1O95841 491 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 CSTAP01040 98 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 CYC1P08574 325 aa18.26■□□□□ 0.51
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