RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KCNA10Q16322 511 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 OR2AP1Q8NGE2 309 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 ZNF275Q9NSD4 429 aaPredicted RBP17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 MRPL15Q9P015 296 aaKnown RBP17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 ENTPD4Q9Y227 616 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 BACE2Q9Y5Z0 518 aa17.4■□□□□ 0.38
ECHDC1-214ENST00000474289 FAM183AA6NL82 134 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 APOC3P02656 99 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 NR2F1P10589 423 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 GJA1P17302 382 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 GDNFP39905 211 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 BUD31P41223 144 aaPredicted RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 FLI1Q01543 452 aaPredicted RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 HTR4Q13639 388 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 HLXQ14774 488 aaPredicted RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 TMEM255AQ5JRV8 349 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 CDC73Q6P1J9 531 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 SZRD1Q7Z422 152 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 HSD17B13Q7Z5P4 300 aaPredicted RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 CEACAM19Q7Z692 300 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 WDR34Q96EX3 536 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 WDR89Q96FK6 387 aaPredicted RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 AHCYL2Q96HN2 611 aaKnown RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 USB1Q9BQ65 265 aaKnown RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 OR10A4Q9H209 315 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 HINT3Q9NQE9 182 aaKnown RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 PRKAB1Q9Y478 270 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 HTTP42858 3142 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 SELENOFO60613 162 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 SNRPBP14678 240 aaKnown RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 MAZP56270 477 aaKnown RBP17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 METTL11BQ5VVY1 283 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 ACBD7Q8N6N7 88 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 OR5W2Q8NH69 310 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 SEC22CQ9BRL7 303 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 UQCC2Q9BRT2 126 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 IFT22Q9H7X7 185 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 B4GALT6Q9UBX8 382 aa17.39■□□□□ 0.37
ECHDC1-214ENST00000474289 E9PI62 339 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 PGRMC2O15173 223 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 MID1O15344 667 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 HYAL3O43820 417 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 SUSD5O60279 629 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 PRAF2O60831 178 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CBX7O95931 251 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CTGFP29279 349 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 PDHA2P29803 388 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CCR8P51685 355 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CAMK1Q14012 370 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 TAF1CQ15572 869 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 HIST2H2AA3Q6FI13 130 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 OR5M10Q6IEU7 315 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC9B2Q86UD5 537 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 OR1S1Q8NH92 325 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 TRIM36Q9NQ86 728 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 TEX10Q9NXF1 929 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 DYRK1BQ9Y463 629 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 A0A1B0GUH1 482 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 OR5K4A6NMS3 321 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 GIPP09681 153 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CYBAP13498 195 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 IFNGR2P38484 337 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 OMPP47874 163 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 TAS2R41P59536 307 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 FUT10Q6P4F1 479 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 CPOQ8IVL8 374 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 IZUMO1Q8IYV9 350 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 TMEM99Q8N816 258 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM98AQ8NCA5 519 aaKnown RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 SMIM4Q8WVI0 70 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 RGMAQ96B86 450 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 ORAI3Q9BRQ5 295 aa17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 H2AFY2Q9P0M6 372 aaPredicted RBP17.38■□□□□ 0.37
ECHDC1-214ENST00000474289 ZC3H12DA2A288 527 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RTCAO00442 366 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RP2O75695 350 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RPLP2P05387 115 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ATF1P18846 271 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PSMB1P20618 241 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 CALCRP30988 508 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 S100A11P31949 105 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC11A1P49279 550 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 CTSCP53634 463 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC3A1Q07837 685 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PGGHGQ32M88 737 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ZDHHC20Q5W0Z9 365 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 B3GNTL1Q67FW5 361 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SPICQ8N5J4 248 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SORCS1Q8WY21 1168 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 OSTF1Q92882 214 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SMAD5Q99717 465 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms