RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LRIG3Q6UXM1 1119 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 TFAP2EQ6VUC0 442 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 CDYL2Q8N8U2 506 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 GATSQ8NAP1 163 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 ABHD3Q8WU67 409 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 SMAP2Q8WU79 429 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 TRAF4Q9BUZ4 470 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 C1QTNF3Q9BXJ4 246 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 GLIPR2Q9H4G4 154 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 TNFRSF12AQ9NP84 129 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PFDN4Q9NQP4 134 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 FAM120CQ9NX05 1096 aaKnown RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 NINJ2Q9NZG7 142 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 MCM8Q9UJA3 840 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 C19orf53Q9UNZ5 99 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 OR10H1Q9Y4A9 318 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 AP4B1Q9Y6B7 739 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 A8MV72 311 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ADAMDEC1O15204 470 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TLX2O43763 284 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ESRRBO95718 433 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ABHD2P08910 425 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 PPP3CBP16298 524 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 STX2P32856 288 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 RFX3P48380 749 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 SERPINB8P50452 374 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 C21orf58P58505 322 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 OCRLQ01968 901 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 SPOCK1Q08629 439 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 CSTF3Q12996 717 aaKnown RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 NAB1Q13506 487 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 SLC29A2Q14542 456 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 CD226Q15762 336 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 SGCBQ16585 318 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 FIGNL1Q6PIW4 674 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 IL17RELQ6ZVW7 336 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TUSC5Q8IXB3 177 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 FAM9CQ8IZT9 166 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 OR2L13Q8N349 312 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 GBP7Q8N8V2 638 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 HOXB13Q92826 284 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ERP27Q96DN0 273 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 OTUB1Q96FW1 271 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 RNF145Q96MT1 663 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ZIM3Q96PE6 472 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM237Q96Q45 408 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 LMF2Q9BU23 707 aaKnown RBP8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM109Q9BVC6 243 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 FAIM2Q9BWQ8 316 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 VPS29Q9UBQ0 182 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 ABCG2Q9UNQ0 655 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 B3GALT5Q9Y2C3 310 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 GPR52Q9Y2T5 361 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 TIMM22Q9Y584 194 aa8.54□□□□□ -1.04
MCF2L-223ENST00000473345 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 A0A087WV62 115 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 A0A1W2PRB8 838 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 UBFD1O14562 309 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 SSX4O60224 188 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 GUCY1B2O75343 617 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 LY6HO94772 140 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 OXSR1O95747 527 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 FAM157CP0CG43 387 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 TIA1P31483 386 aaKnown RBP eCLIP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 IDUAP35475 653 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 KRT20P35900 424 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 EEFSECP57772 596 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 MRPS22P82650 360 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 PRR5P85299 388 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 CLCQ05315 142 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 BTKQ06187 659 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF239Q16600 458 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM249Q2WGJ8 235 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 GLYR1Q49A26 553 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 CYP27C1Q4G0S4 372 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF385BQ569K4 471 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 SFRP5Q5T4F7 317 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 FAM71E1Q6IPT2 247 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 C11orf71Q6IPW1 123 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 B3GLCTQ6Y288 498 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF551Q7Z340 670 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 DTX2Q86UW9 622 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 GTPBP8Q8N3Z3 284 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 OR2V1Q8NHB1 315 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 FBXO30Q8TB52 745 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 PIWIL2Q8TC59 973 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 RNF128Q8TEB7 428 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 GFM2Q969S9 779 aaKnown RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 FBXW5Q969U6 566 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 ELP4Q96EB1 424 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 GIMAP5Q96F15 307 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms