RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RNFT1Q5M7Z0 435 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 NET1Q7Z628 596 aaPredicted RBP18.24■□□□□ 0.51
SF1-213ENST00000472725 GALNT10Q86SR1 603 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 SLC30A8Q8IWU4 369 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 TMEM251Q8N6I4 163 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 ANKFN1Q8N957 763 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 WDSUB1Q8N9V3 476 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 JSRP1Q96MG2 331 aaPredicted RBP18.24■□□□□ 0.51
SF1-213ENST00000472725 SLC38A1Q9H2H9 487 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 UBQLN3Q9H347 655 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 IKZF5Q9H5V7 419 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 ACKR4Q9NPB9 350 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 FLRT3Q9NZU0 649 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 TAGLN3Q9UI15 199 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 MKLN1Q9UL63 735 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 C15orf41Q9Y2V0 281 aa18.24■□□□□ 0.51
SF1-213ENST00000472725 AIM2O14862 343 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 SCO2O43819 266 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 UGT2B17O75795 530 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 CHRM4P08173 479 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 TDGF1P3P51864 188 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 CAPRIN1Q14444 709 aaKnown RBP18.23■□□□□ 0.51
SF1-213ENST00000472725 GANABQ14697 944 aaKnown RBP18.23■□□□□ 0.51
SF1-213ENST00000472725 SLC10A1Q14973 349 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 ZSWIM7Q19AV6 140 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 PRR30Q53SZ7 412 aaPredicted RBP18.23■□□□□ 0.51
SF1-213ENST00000472725 APOOLQ6UXV4 268 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 ZNF605Q86T29 641 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 MARCH3Q86UD3 253 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 CMIPQ8IY22 773 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 FITM2Q8N6M3 262 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 FADS6Q8N9I5 356 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 ST6GALNAC3Q8NDV1 305 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 BBS10Q8TAM1 723 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 MIB2Q96AX9 1013 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 GPR137Q96N19 417 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 GPATCH1Q9BRR8 931 aaKnown RBP18.23■□□□□ 0.51
SF1-213ENST00000472725 PTGES2Q9H7Z7 377 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 PLSCR2Q9NRY7 297 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 PRDM4Q9UKN5 801 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 DSPPQ9NZW4 1301 aa18.23■□□□□ 0.51
SF1-213ENST00000472725 AGAP5A6NIR3 686 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 C5orf58C9J3I9 102 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 GNB5O14775 395 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 ZIC2O95409 532 aaPredicted RBP18.22■□□□□ 0.51
SF1-213ENST00000472725 IGHG3P01860 377 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 HPNP05981 417 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 BCHEP06276 602 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 ETS2P15036 469 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 SLC6A2P23975 617 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 MST1P26927 711 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 MTPNP58546 118 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 CDK6Q00534 326 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 CHRNEQ04844 493 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 MAPK11Q15759 364 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 REEP3Q6NUK4 255 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 C8orf82Q6P1X6 216 aaPredicted RBP18.22■□□□□ 0.51
SF1-213ENST00000472725 PEX5LQ8IYB4 626 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 C11orf65Q8NCR3 313 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 GALNT11Q8NCW6 608 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 DUSP19Q8WTR2 217 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 TMEM19Q96HH6 336 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 GNRHR2Q96P88 292 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 TREX2Q9BQ50 279 aaPredicted RBP18.22■□□□□ 0.51
SF1-213ENST00000472725 ECSITQ9BQ95 431 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 CACYBPQ9HB71 228 aaKnown RBP18.22■□□□□ 0.51
SF1-213ENST00000472725 NDE1Q9NXR1 346 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 SLC35A3Q9Y2D2 325 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 SHANK1Q9Y566 2161 aa18.22■□□□□ 0.51
SF1-213ENST00000472725 SERINC4A6NH21 518 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 NPIPA5E9PKD4 350 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 SUSD5O60279 629 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 EIF4E2O60573 245 aaKnown RBP18.21■□□□□ 0.51
SF1-213ENST00000472725 HCN1O60741 890 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 DBIP07108 87 aaKnown RBP18.21■□□□□ 0.51
SF1-213ENST00000472725 RPS4Y1P22090 263 aaKnown RBP18.21■□□□□ 0.51
SF1-213ENST00000472725 GDF1P27539 372 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 RFC3P40938 356 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 MAGEA5P43359 124 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 NUDT2P50583 147 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 SUMO3P55854 103 aaPredicted RBP18.21■□□□□ 0.51
SF1-213ENST00000472725 FGFBP1Q14512 234 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 CYP51A1Q16850 503 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 CMPK2Q5EBM0 449 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 PDZK1Q5T2W1 519 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 ERICH5Q6P6B1 374 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 ATCAYQ86WG3 371 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 GHDCQ8N2G8 530 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 HIPK4Q8NE63 616 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 TOR1AIP2Q8NFQ8 470 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 OR4K17Q8NGC6 315 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 SLC39A3Q9BRY0 314 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 RUBCNLQ9H714 662 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.21■□□□□ 0.51
SF1-213ENST00000472725 SEC14L3Q9UDX4 400 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 KCNE5Q9UJ90 142 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 NPIPA1Q9UND3 350 aa18.21■□□□□ 0.51
SF1-213ENST00000472725 A0A1B0GVC2 190 aa18.2■□□□□ 0.5
SF1-213ENST00000472725 FAM166BA8MTA8 275 aa18.2■□□□□ 0.5
SF1-213ENST00000472725 PGM3O95394 542 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms