RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NCAPD2Q15021 1401 aa3.9□□□□□ -1.78
CLK1-209ENST00000472679 FAM74A7A6NL05 159 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 EFNA2O43921 213 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 UQCRBP14927 111 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 ELK1P19419 428 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 PAICSP22234 425 aaKnown RBP3.9□□□□□ -1.79
CLK1-209ENST00000472679 MAPK3P27361 379 aaPredicted RBP3.9□□□□□ -1.79
CLK1-209ENST00000472679 PTGFRP43088 359 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 RND3P61587 244 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 BCL2L1Q07817 233 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 CHI3L2Q15782 390 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 CDC37Q16543 378 aaPredicted RBP3.9□□□□□ -1.79
CLK1-209ENST00000472679 FAM74A3Q4VXF1 159 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 OR2B11Q5JQS5 317 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 DCST2Q5T1A1 773 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 PVRIGQ6DKI7 326 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 SERPINA9Q86WD7 417 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.79
CLK1-209ENST00000472679 M1APQ8TC57 530 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 HAVCR1Q96D42 359 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 VAT1LQ9HCJ6 419 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 AGPAT5Q9NUQ2 364 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 ANKMY1Q9P2S6 941 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 SPRR3Q9UBC9 169 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 AP4B1Q9Y6B7 739 aa3.9□□□□□ -1.79
CLK1-209ENST00000472679 FAM231BA6NCW3 169 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 B4DXG7 233 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 SDHDO14521 159 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 TRIM3O75382 744 aaPredicted RBP3.89□□□□□ -1.79
CLK1-209ENST00000472679 VPS26AO75436 327 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 STX11O75558 287 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 STAM2O75886 525 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 ANP32DO95626 131 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 ADRA1AP35348 466 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 EFNA3P52797 238 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 GMFBP60983 142 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 HSF2Q03933 536 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 TRIP10Q15642 601 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 TGIF2LYQ8IUE0 185 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 OR10H4Q8NGA5 316 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 TRUB1Q8WWH5 349 aaKnown RBP3.89□□□□□ -1.79
CLK1-209ENST00000472679 SELENOMQ8WWX9 145 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 FRAT1Q92837 279 aaPredicted RBP3.89□□□□□ -1.79
CLK1-209ENST00000472679 VPS39Q96JC1 886 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 CCSER1Q9C0I3 900 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 COG4Q9H9E3 785 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 ODF2LQ9ULJ1 636 aa3.89□□□□□ -1.79
CLK1-209ENST00000472679 RAI1Q7Z5J4 1906 aaPredicted RBP3.89□□□□□ -1.79
CLK1-209ENST00000472679 GPX5O75715 221 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 BCKDHAP12694 445 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 H2AFXP16104 143 aaPredicted RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 DPP4P27487 766 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 ADORA2BP29275 332 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 DRD3P35462 400 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 GNPDA1P46926 289 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 MTTPP55157 894 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 MRPS11P82912 194 aaKnown RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 ST3GAL3Q11203 375 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 OR5M10Q6IEU7 315 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 UNC5DQ6UXZ4 953 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 TFAP2EQ6VUC0 442 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 FRA10AC1Q70Z53 315 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 CBWD2Q8IUF1 395 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 MISPQ8IVT2 679 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 ZSCAN4Q8NAM6 433 aaPredicted RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 PINX1Q96BK5 328 aaKnown RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 HPDLQ96IR7 371 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 PLEKHF1Q96S99 279 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 RHOJQ9H4E5 214 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 CAB39LQ9H9S4 337 aa3.88□□□□□ -1.79
CLK1-209ENST00000472679 XPO7Q9UIA9 1087 aaKnown RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 HOOK1Q9UJC3 728 aaKnown RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 SAMD4AQ9UPU9 718 aaKnown RBP3.88□□□□□ -1.79
CLK1-209ENST00000472679 DHRS7CA6NNS2 312 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 DUX1O43812 170 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 CABYRO75952 493 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 KRT6AP02538 564 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 KRT6BP04259 564 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 AXLP30530 894 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 KRT6CP48668 564 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 OSTNP61366 133 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 KYAT1Q16773 422 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 LINC01620Q4KN68 170 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 OR8G2PQ6IF36 304 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 SCYL2Q6P3W7 929 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 SCARA5Q6ZMJ2 495 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 OR2L5Q8NG80 312 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 OR2A12Q8NGT7 310 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 CNIH3Q8TBE1 160 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 IL4I1Q96RQ9 567 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 ZNF184Q99676 751 aaPredicted RBP3.87□□□□□ -1.79
CLK1-209ENST00000472679 FEM1AQ9BSK4 669 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 EHD1Q9H4M9 534 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 ECT2Q9H8V3 914 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 PAK1IP1Q9NWT1 392 aaPredicted RBP3.87□□□□□ -1.79
CLK1-209ENST00000472679 RNF6Q9Y252 685 aa3.87□□□□□ -1.79
CLK1-209ENST00000472679 COL16A1Q07092 1604 aaPredicted RBP3.87□□□□□ -1.79
CLK1-209ENST00000472679 CHADO15335 359 aa3.86□□□□□ -1.79
CLK1-209ENST00000472679 AKR7A3O95154 331 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms