RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TAB1Q15750 504 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 SGCBQ16585 318 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 NRF1Q16656 503 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 GLYR1Q49A26 553 aaPredicted RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 CLEC2AQ6UVW9 174 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 EXOC3L1Q86VI1 746 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 CCDC25Q86WR0 208 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 GABRG1Q8N1C3 465 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 ZNF619Q8N2I2 560 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 KBTBD8Q8NFY9 601 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.29□□□□□ -1.08
VCL-204ENST00000472585 ACPTQ9BZG2 426 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 TRIM2Q9C040 744 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 PFDN4Q9NQP4 134 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 SLC35C2Q9NQQ7 365 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 FBXO34Q9NWN3 711 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 FAM120CQ9NX05 1096 aaKnown RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 XPR1Q9UBH6 696 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 MCM8Q9UJA3 840 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 C19orf53Q9UNZ5 99 aaPredicted RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 VDAC3Q9Y277 283 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 GPR52Q9Y2T5 361 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 OR10H1Q9Y4A9 318 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 RNF115Q9Y4L5 304 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 PKD1L1Q8TDX9 2849 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ANGPTL1O95841 491 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 JUNP05412 331 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 CD3EP07766 207 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 CFPP27918 469 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 AGTR1P30556 359 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 STX2P32856 288 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 KRT20P35900 424 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 MAP3K8P41279 467 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 DSCR9P59020 149 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 RPS3AP61247 264 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 GNG11P61952 73 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 LOXL1Q08397 574 aaPredicted RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 CSTF3Q12996 717 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 CALCOCO2Q13137 446 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 NAB1Q13506 487 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 SQLEQ14534 574 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 GANABQ14697 944 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ZNF672Q499Z4 452 aaPredicted RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 UNC50Q53HI1 259 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 PPP4R4Q6NUP7 873 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 FIGNL1Q6PIW4 674 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 TMEM107Q6UX40 140 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 CCDC91Q7Z6B0 441 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 CDYL2Q8N8U2 506 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 SPATA4Q8NEY3 305 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 OR4C3Q8NH37 302 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 PIK3R3Q92569 461 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 SLC9A6Q92581 669 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ZNF775Q96BV0 537 aaPredicted RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 TRAF4Q9BUZ4 470 aaPredicted RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 FAIM2Q9BWQ8 316 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 C1QTNF3Q9BXJ4 246 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 C12orf65Q9H3J6 166 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 GLIPR2Q9H4G4 154 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ESRP2Q9H6T0 727 aaKnown RBP8.28□□□□□ -1.08
VCL-204ENST00000472585 TMEM185BQ9H7F4 350 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 CHODLQ9H9P2 273 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 NGBQ9NPG2 151 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 TAS2R9Q9NYW1 312 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 KCNS2Q9ULS6 477 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 ABCG2Q9UNQ0 655 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 B3GALT5Q9Y2C3 310 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 EMC9Q9Y3B6 208 aa8.28□□□□□ -1.08
VCL-204ENST00000472585 A0A087WV62 115 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 A8MT66 165 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ESPNB1AK53 854 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 SHISA9B4DS77 424 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ZNF814B7Z6K7 855 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 TNFSF11O14788 317 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PCDH7O60245 1069 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 UTS2O95399 124 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ESRRBO95718 433 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 OTCP00480 354 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PLGP00747 810 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 RBP1P09455 135 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ZNF16P17020 682 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 RFX3P48380 749 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 CTBP2P56545 445 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 C21orf58P58505 322 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PRR5P85299 388 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 BSPH1Q075Z2 132 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 C2orf54Q08AI8 447 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ZNF155Q12901 538 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 UAP1Q16222 522 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 ERCC6LQ2NKX8 1250 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 KLC3Q6P597 504 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms