RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TBXA2RP21731 343 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 CD79BP40259 229 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 PCYT1AP49585 367 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 OCRLQ01968 901 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 FOXD4Q12950 439 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-213ENST00000471978 SGCBQ16585 318 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 DUSP5Q16690 384 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 TMEM44Q2T9K0 475 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 MFSD12Q6NUT3 480 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 ZNF474Q6S9Z5 364 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-213ENST00000471978 RIBC1Q8N443 379 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-213ENST00000471978 OR6Y1Q8NGX8 325 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 FAM110BQ8TC76 370 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 C16orf58Q96GQ5 468 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 ANKZF1Q9H8Y5 726 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 SLC17A7Q9P2U7 560 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 STOML1Q9UBI4 398 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 A0A1W2PPR1 153 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 TMEM114B3SHH9 223 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 SPAG7O75391 227 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ALOX5P09917 674 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 DDX5P17844 614 aaKnown RBP20.27■□□□□ 0.84
C9orf3-213ENST00000471978 HPCAL1P37235 193 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ADAM8P78325 824 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 FGFBP1Q14512 234 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ZCCHC12Q6PEW1 402 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 LRIG3Q6UXM1 1119 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ZAR1Q86SH2 424 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 GGNQ86UU5 652 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 COX18Q8N8Q8 333 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 GATSQ8NAP1 163 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 AGR3Q8TD06 166 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 OTUB1Q96FW1 271 aaPredicted RBP20.27■□□□□ 0.84
C9orf3-213ENST00000471978 WFIKKN1Q96NZ8 548 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 SLC39A3Q9BRY0 314 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 FBXO34Q9NWN3 711 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ELOVL5Q9NYP7 299 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 GIMAP2Q9UG22 337 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 ATP6V1HQ9UI12 483 aa20.27■□□□□ 0.84
C9orf3-213ENST00000471978 A0A087WZY1 265 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 EIF1AYO14602 144 aaKnown RBP20.26■□□□□ 0.83
C9orf3-213ENST00000471978 CGAP01215 116 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 NUDT17P0C025 328 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 FCGR2AP12318 317 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 POU2F1P14859 743 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 HPGDP15428 266 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 ZNF17P17021 662 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 MAPK1P28482 360 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 EIF1AXP47813 144 aaKnown RBP20.26■□□□□ 0.83
C9orf3-213ENST00000471978 KCNJ5P48544 419 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 SERPINB4P48594 390 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 MLC1Q15049 377 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 PPP4R4Q6NUP7 873 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 ZCCHC23Q6ZST2 131 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 OR7A2PQ8NGA2 310 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 JADE3Q92613 823 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 FAM120BQ96EK7 910 aaKnown RBP20.26■□□□□ 0.83
C9orf3-213ENST00000471978 PPP3R2Q96LZ3 170 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 UBQLN4Q9NRR5 601 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 KLHL28Q9NXS3 571 aa20.26■□□□□ 0.83
C9orf3-213ENST00000471978 C6orf203Q9P0P8 240 aaPredicted RBP20.26■□□□□ 0.83
C9orf3-213ENST00000471978 SCAMP2O15127 329 aaKnown RBP20.25■□□□□ 0.83
C9orf3-213ENST00000471978 CTIFO43310 598 aaKnown RBP20.25■□□□□ 0.83
C9orf3-213ENST00000471978 PEX11AO75192 247 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 AQP8O94778 261 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 CD8BP10966 210 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 LCN1P31025 176 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 UGT2B10P36537 528 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 PRIM2P49643 509 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 IFFO1Q0D2I5 559 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 WDR75Q8IWA0 830 aaKnown RBP20.25■□□□□ 0.83
C9orf3-213ENST00000471978 TCP10LQ8TDR4 215 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 CHMP6Q96FZ7 201 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 MED18Q9BUE0 208 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 PRRG4Q9BZD6 226 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 SIRT3Q9NTG7 399 aaPredicted RBP20.25■□□□□ 0.83
C9orf3-213ENST00000471978 ZCCHC3Q9NUD5 404 aaKnown RBP20.25■□□□□ 0.83
C9orf3-213ENST00000471978 ZNF226Q9NYT6 803 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 LGALS13Q9UHV8 139 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 PROCRQ9UNN8 238 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 SNX8Q9Y5X2 465 aa20.25■□□□□ 0.83
C9orf3-213ENST00000471978 A0A1W2PRB8 838 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 SCDO00767 359 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 SLU7O95391 586 aaKnown RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 HMGN2P05204 90 aaKnown RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 CD53P19397 219 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 RPL3P39023 403 aaKnown RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 ZNF41P51814 821 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 VSNL1P62760 191 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 POU6F2P78424 691 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 GUSBP1Q15486 140 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 XKR7Q5GH72 579 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 EXOSC6Q5RKV6 272 aaKnown RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 CCNJQ5T5M9 372 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 FAM214BQ7L5A3 538 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 MISPQ8IVT2 679 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 GTPBP8Q8N3Z3 284 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 ZNF610Q8N9Z0 462 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 ACTRT2Q8TDY3 377 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms