RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZIC1Q15915 447 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 CCL14Q16627 93 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 SLC5A12Q1EHB4 618 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 MOGAT2Q3SYC2 334 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 STAC2Q6ZMT1 411 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 KDM7AQ6ZMT4 941 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 RUFY3Q7L099 469 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 MOB3BQ86TA1 216 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 OR2T6Q8NHC8 308 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 FAM76AQ8TAV0 307 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 RAB3IL1Q8TBN0 382 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 AGR3Q8TD06 166 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 SLC2A14Q8TDB8 520 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 BRSK1Q8TDC3 778 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 BADQ92934 168 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 SLC39A3Q9BRY0 314 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 CHRDL1Q9BU40 450 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 DUSP16Q9BY84 665 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 NXF5Q9H1B4 397 aaKnown RBP5.46□□□□□ -1.54
SMC5-202ENST00000471372 ZFP14Q9HCL3 533 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 POLE4Q9NR33 117 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 GLRX2Q9NS18 164 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 SIGLEC8Q9NYZ4 499 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 IL36GQ9NZH8 169 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 ZNF221Q9UK13 617 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 RARRES3Q9UL19 164 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 POLDIP2Q9Y2S7 368 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 TIMM10BQ9Y5J6 103 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 ALG6Q9Y672 507 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 MYH15Q9Y2K3 1946 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 FRMPD4Q14CM0 1322 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 TTC21BQ7Z4L5 1316 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 WDR19Q8NEZ3 1342 aa5.46□□□□□ -1.54
SMC5-202ENST00000471372 KANK1Q14678 1352 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 TRBV7-9A0A0J9YWB2 115 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 NPIPA7E9PJI5 369 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 MSH4O15457 936 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 LRATO95237 230 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 TSPAN12O95859 305 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 NPIPA8P0DM63 369 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 GZMAP12544 262 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 HSD17B1P14061 328 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 ZNF10P21506 573 aaPredicted RBP5.45□□□□□ -1.54
SMC5-202ENST00000471372 CSRP3P50461 194 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 GSCP56915 257 aaPredicted RBP5.45□□□□□ -1.54
SMC5-202ENST00000471372 SSX2Q16385 188 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 SNAI3Q3KNW1 292 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 BCL7AQ4VC05 210 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 TP53I3Q53FA7 332 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 ARMC12Q5T9G4 340 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 PRAMEF20Q5VT98 475 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 UQCC3Q6UW78 93 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 BPIFB2Q8N4F0 458 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 MFSD9Q8NBP5 474 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 OR1L4Q8NGR5 311 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 FNDC8Q8TC99 324 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 NSMCE3Q96MG7 304 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 LGMNQ99538 433 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 SP140LQ9H930 580 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 SPATA7Q9P0W8 599 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 MLXQ9UH92 298 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 BARX2Q9UMQ3 279 aaPredicted RBP5.45□□□□□ -1.54
SMC5-202ENST00000471372 NPIPA1Q9UND3 350 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
SMC5-202ENST00000471372 IGHV4-30-2A0A087WSY4 118 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 MEX3AA1L020 520 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 BCLAF3A2AJT9 711 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 OR6C65A6NJZ3 312 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 RAMP1O60894 148 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 N4BP1O75113 896 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 IGHV3-9P01782 118 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 ACADSP16219 412 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 PPP2R1BP30154 601 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 TMEM50BP56557 158 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 RPL8P62917 257 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 CALCOCO2Q13137 446 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 PEX6Q13608 980 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 SIX1Q15475 284 aaPredicted RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 ZFP69Q49AA0 526 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 SFT2D3Q587I9 215 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 MS4A13Q5J8X5 152 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 CTSL3PQ5NE16 218 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 C1orf185Q5T7R7 199 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 WSCD1Q658N2 575 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 OR2A2Q6IF42 318 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 APTXQ7Z2E3 356 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 CEACAM19Q7Z692 300 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 DHDDSQ86SQ9 333 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 ECHDC2Q86YB7 292 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 C17orf47Q8NEP4 570 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 RFESDQ8TAC1 157 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 WBP1Q96G27 269 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 RBM14Q96PK6 669 aaKnown RBP5.44□□□□□ -1.54
SMC5-202ENST00000471372 SLC38A2Q96QD8 506 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 MTMR9Q96QG7 549 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 LITAFQ99732 161 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 NUP58Q9BVL2 599 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 TSSK1BQ9BXA7 367 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 FAM192AQ9GZU8 254 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 RCOR3Q9P2K3 495 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms