RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 NRBF2Q96F24 287 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
RUBCN-208ENST00000471364 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 AMBRA1Q9C0C7 1298 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 TOR3AQ9H497 397 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 ZNF696Q9H7X3 374 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 BCL2L10Q9HD36 194 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 EQTNQ9NQ60 294 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 PNPLA3Q9NST1 481 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 CUTCQ9NTM9 273 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 NDUFAF4Q9P032 175 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 HCN3Q9P1Z3 774 aa11.72□□□□□ -0.53
RUBCN-208ENST00000471364 TMEFF2Q9UIK5 374 aaPredicted RBP11.72□□□□□ -0.53
RUBCN-208ENST00000471364 SAMHD1Q9Y3Z3 626 aaKnown RBP11.72□□□□□ -0.53
RUBCN-208ENST00000471364 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
RUBCN-208ENST00000471364 GPC6Q9Y625 555 aaPredicted RBP11.72□□□□□ -0.53
RUBCN-208ENST00000471364 FITM1A5D6W6 292 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ASNA1O43681 348 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 NME6O75414 186 aaPredicted RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 SMNDC1O75940 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 NSA2O95478 260 aaKnown RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 CLIC3O95833 236 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 HPP00738 406 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 CHRM4P08173 479 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 GRNP28799 593 aaKnown RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 PPP2R1BP30154 601 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 RRM2P31350 389 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 PTGER4P35408 488 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 KCNJ5P48544 419 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 CRISP3P54108 245 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ARG2P78540 354 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 EPS8Q12929 822 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 FAM53BQ14153 422 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 GRM7Q14831 915 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 DUSP7Q16829 419 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 FAM214AQ32MH5 1076 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 GARNL3Q5VVW2 1013 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 KRT80Q6KB66 452 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 MFSD12Q6NUT3 480 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 NIPAL1Q6NVV3 410 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 SHISA6Q6ZSJ9 500 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 COX15Q7KZN9 410 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 GDF7Q7Z4P5 450 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 OR2L13Q8N349 312 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 SIMC1Q8NDZ2 872 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 DOK4Q8TEW6 326 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 SLC35A4Q96G79 324 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 COL21A1Q96P44 957 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 MS4A4EQ96PG1 132 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ZNF347Q96SE7 839 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ZNF607Q96SK3 696 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 EPYCQ99645 322 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 TREX2Q9BQ50 279 aaPredicted RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 EXD2Q9NVH0 621 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 PDP1Q9P0J1 537 aaPredicted RBP11.71□□□□□ -0.53
RUBCN-208ENST00000471364 PTGFRNQ9P2B2 879 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 TESMINQ9Y4I5 508 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ENPP4Q9Y6X5 453 aa11.71□□□□□ -0.53
RUBCN-208ENST00000471364 ANKRD17O75179 2603 aaKnown RBP11.71□□□□□ -0.54
RUBCN-208ENST00000471364 FBN2P35556 2912 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 HNRNPCL2B2RXH8 293 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 J3KTA2 159 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 TNFRSF11BO00300 401 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 MITFO75030 526 aaPredicted RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 SERPINB7O75635 380 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 ATP1B1P05026 303 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 FESP07332 822 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 IFI6P09912 130 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 ACP2P11117 423 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 RNH1P13489 461 aaKnown RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 ITGA2P17301 1181 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 NT5EP21589 574 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 XCR1P46094 333 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 YAP1P46937 504 aaKnown RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 AVPR1BP47901 424 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 DAPP51397 102 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 ARHGDIAP52565 204 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 SKP1P63208 163 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 MAT1AQ00266 395 aaKnown RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 SPIBQ01892 262 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 OCA2Q04671 838 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 Q0VFX4 171 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 MGAT2Q10469 447 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 GNA13Q14344 377 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 INAQ16352 499 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 PRICKLE4Q2TBC4 344 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 GPAT3Q53EU6 434 aa11.7□□□□□ -0.54
RUBCN-208ENST00000471364 TRMT12Q53H54 448 aaKnown RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
RUBCN-208ENST00000471364 PRAMEF8Q5VWM4 474 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms