RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 HLCSP50747 726 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 SLC34A1Q06495 639 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 DUSP8Q13202 625 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 VEZF1Q14119 521 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 RPS26P11Q5JNZ5 115 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 QSOX2Q6ZRP7 698 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 SLC44A2Q8IWA5 706 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 GALNT12Q8IXK2 581 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 LGI4Q8N135 537 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 VWA5B2Q8N398 1253 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 NFAM1Q8NET5 270 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 OR52E4Q8NGH9 312 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 OR7D2Q96RA2 312 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 SEPHS2Q99611 448 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 ADAP2Q9NPF8 381 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-201ENST00000470091 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 TRBV11-1A0A0K0K1C0 115 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 TCRBV16S1A1N1A0A5B0 115 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PRAMEF27A3QJZ7 478 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SAGE2PA6NJ88 616 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 C5orf58C9J3I9 102 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 HRKO00198 91 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PRRG2O14669 202 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 TPST1O60507 370 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PLOD3O60568 738 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 TIPRLO75663 272 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PDE9AO76083 593 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PRKD3O94806 890 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF682O95780 498 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 IFNA16P05015 189 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 IFI6P09912 130 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ACP2P11117 423 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 AGAP20933 346 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 KDELR2P33947 212 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 MAGEA8P43361 318 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 MAN2A2P49641 1150 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 MEOX1P50221 254 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ANXA11P50995 505 aaKnown RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 CRYBA2P53672 197 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 FUT5Q11128 374 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF155Q12901 538 aaPredicted RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 MAPK11Q15759 364 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 OLIG3Q7RTU3 272 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 FGD2Q7Z6J4 655 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SLC30A8Q8IWU4 369 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 LILRA2Q8N149 483 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PQLC1Q8N2U9 271 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 TMEM156Q8N614 296 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ANKFN1Q8N957 763 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 OR52R1Q8NGF1 315 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 OR10Q1Q8NGQ4 319 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SLC38A5Q8WUX1 472 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 XAGE5Q8WWM1 108 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 RIT1Q92963 219 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 CTHRC1Q96CG8 243 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SLC47A1Q96FL8 570 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PKP2Q99959 881 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 ACTRT3Q9BYD9 372 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 LIN28AQ9H9Z2 209 aaKnown RBP12.5□□□□□ -0.41
LINC00173-201ENST00000470091 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 KCNE3Q9Y6H6 103 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 CACNA1CQ13936 2221 aa12.5□□□□□ -0.41
LINC00173-201ENST00000470091 SPG11Q96JI7 2443 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 ADAM10O14672 748 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TFECO14948 347 aaPredicted RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 PEX1O43933 1283 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 HS6ST1O60243 411 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 COQ9O75208 318 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 MT-ND1P03886 318 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 OPN1SWP03999 348 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TPOP07202 933 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TFPTP0C1Z6 253 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 NR2F1P10589 423 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 UMPSP11172 480 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 S1PR1P21453 382 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 SSTR4P31391 388 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TRHRP34981 398 aaPredicted RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 PTGS2P35354 604 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 CLCN2P51788 898 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 PCBP3P57721 371 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms