RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MS4A4EQ96PG1 132 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 TSSK3Q96PN8 268 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 PRRG4Q9BZD6 226 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 C12orf65Q9H3J6 166 aaKnown RBP15.71■□□□□ 0.11
COL7A1-208ENST00000470076 SH3BP4Q9P0V3 963 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 VDAC3Q9Y277 283 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 TMED5Q9Y3A6 229 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 ROS1P08922 2347 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 SMIM23A6NLE4 172 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 EIF1AYO14602 144 aaKnown RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 AKAP10O43572 662 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 GMFGO60234 142 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 AQP8O94778 261 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 OXSR1O95747 527 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 INHBBP09529 407 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 FPR1P21462 350 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 TBXA2RP21731 343 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 LCN1P31025 176 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 ASMTP46597 345 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 EIF1AXP47813 144 aaKnown RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 RPL38P63173 70 aaKnown RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 RFTN2Q52LD8 501 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 ZCCHC12Q6PEW1 402 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 SZRD1Q7Z422 152 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 C10orf107Q8IVU9 208 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 WDR75Q8IWA0 830 aaKnown RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 GTPBP8Q8N3Z3 284 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-208ENST00000470076 SLC16A11Q8NCK7 471 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 FAM110BQ8TC76 370 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 ACTRT2Q8TDY3 377 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 ZBTB8AQ96BR9 441 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 MTERF3Q96E29 417 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 GIMAP5Q96F15 307 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 EMC9Q9Y3B6 208 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 FIS1Q9Y3D6 152 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 DSCAMO60469 2012 aa15.7■□□□□ 0.1
COL7A1-208ENST00000470076 UQCRHLA0A096LP55 91 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 C7orf72A4D263 438 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 SHISA8B8ZZ34 492 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 LSM1O15116 133 aaKnown RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 TRIM13O60858 407 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 SMPD2O60906 423 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 KCNK2O95069 426 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 PLGP00747 810 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 ACP2P11117 423 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 DDX5P17844 614 aaKnown RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 ADSLP30566 484 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 SERPINB4P48594 390 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 SLC18A2Q05940 514 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 PCLAFQ15004 111 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 ACKR1Q16570 336 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 KANK2Q63ZY3 851 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 PPP4R4Q6NUP7 873 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 MFSD12Q6NUT3 480 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 ZNF550Q7Z398 422 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 R3HCC1LQ7Z5L2 792 aaKnown RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 GALNT10Q86SR1 603 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 P3H2Q8IVL5 708 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 MISPQ8IVT2 679 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 C4orf33Q8N1A6 199 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 OR6K3Q8NGY3 331 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 GMPPAQ96IJ6 420 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 MARK4Q96L34 752 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 GATA5Q9BWX5 397 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 TUBB1Q9H4B7 451 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 PLSCR4Q9NRQ2 329 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 UBQLN4Q9NRR5 601 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 BAIAP2L1Q9UHR4 511 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 MCTS1Q9ULC4 181 aaKnown RBP15.69■□□□□ 0.1
COL7A1-208ENST00000470076 DNAJC15Q9Y5T4 150 aa15.69■□□□□ 0.1
COL7A1-208ENST00000470076 HEATR5AQ86XA9 2040 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 HSPA4LO95757 839 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 FGF4P08620 206 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 ALOX5P09917 674 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 LINC00032P0C843 101 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 HPGDP15428 266 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 PPP3CBP16298 524 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 IL11P20809 199 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 ZNF41P51814 821 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-208ENST00000470076 CTBP2P56545 445 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 RAC1P63000 192 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 DUSP5Q16690 384 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 Q5PR19 223 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 CPTPQ5TA50 214 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 FIGNL1Q6PIW4 674 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 LRIG3Q6UXM1 1119 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 C20orf204Q6ZNR8 217 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 COX18Q8N8Q8 333 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 OR10D3Q8NH80 312 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 CLHC1Q8NHS4 586 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 FBXO30Q8TB52 745 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 EPS8L3Q8TE67 593 aaKnown RBP15.68■□□□□ 0.1
COL7A1-208ENST00000470076 ZC3HAV1LQ96H79 300 aaKnown RBP15.68■□□□□ 0.1
COL7A1-208ENST00000470076 ADGRG7Q96K78 797 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 KLHL4Q9C0H6 718 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 UBTD1Q9HAC8 227 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 FANCFQ9NPI8 374 aa15.68■□□□□ 0.1
COL7A1-208ENST00000470076 GLRX2Q9NS18 164 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms