RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 DUSP5Q16690 384 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 GALNTL6Q49A17 601 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 CPTPQ5TA50 214 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 SHEQ5VZ18 495 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ZAR1Q86SH2 424 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 TDRPQ86YL5 185 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 P3H2Q8IVL5 708 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ZFP28Q8NHY6 868 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 PIGTQ969N2 578 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 GIMAP5Q96F15 307 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ZBED6CLQ96FA7 236 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-210ENST00000469897 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 CCT7Q99832 543 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 NTMQ9P121 344 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 STOML1Q9UBI4 398 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 DNAJC15Q9Y5T4 150 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 MED13LQ71F56 2210 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 ARHGEF9O43307 516 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CXCL13O43927 109 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 SMPD2O60906 423 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CHEK2O96017 543 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 PLGP00747 810 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CHRNGP07510 517 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 ALOX5P09917 674 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 HPGDP15428 266 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CCKARP32238 428 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 FRKP42685 505 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 LTBQ06643 244 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 PDE7AQ13946 482 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 FGFBP1Q14512 234 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 PCLAFQ15004 111 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 GUSBP1Q15486 140 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 CCNJQ5T5M9 372 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 KANK2Q63ZY3 851 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 MFSD12Q6NUT3 480 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 WDR75Q8IWA0 830 aaKnown RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 DDIASQ8IXT1 998 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 OR10D3Q8NH80 312 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 SH3YL1Q96HL8 342 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 ACSS1Q9NUB1 689 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 TRAF6Q9Y4K3 522 aa11.91□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF469Q96JG9 3925 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-210ENST00000469897 A0A087WZY1 265 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 A0A1W2PRB8 838 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 TMEM233B4DJY2 109 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 SYNGR4O95473 234 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 NGFRP08138 427 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 FGF4P08620 206 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 BCKDHAP12694 445 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 IL11P20809 199 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 PSMA4P25789 261 aaKnown RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ALDH3A1P30838 453 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 CTBP2P56545 445 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 RAC1P63000 192 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 CTU2Q2VPK5 515 aaKnown RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 UGT3A2Q3SY77 523 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ARL13AQ5H913 290 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ZCCHC12Q6PEW1 402 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 LRIG3Q6UXM1 1119 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 CLEC9AQ6UXN8 241 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 EIF1ADQ8N9N8 165 aaKnown RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 POC1BQ8TC44 478 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ACTRT2Q8TDY3 377 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 OSTF1Q92882 214 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 CHMP6Q96FZ7 201 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF764Q96H86 408 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-210ENST00000469897 ADGRG7Q96K78 797 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 MARK4Q96L34 752 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 RNF145Q96MT1 663 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 MS4A4EQ96PG1 132 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 PIP5K1AQ99755 562 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 TRMOQ9BU70 441 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 PPCSQ9HAB8 311 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 UBQLN4Q9NRR5 601 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 MED17Q9NVC6 651 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 GIMAP2Q9UG22 337 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 EMC9Q9Y3B6 208 aa11.9□□□□□ -0.5
CPSF4-210ENST00000469897 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 MAP1AP78559 2803 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 A0A0J9YW62 118 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 SCDO00767 359 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 TNFSF11O14788 317 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 PIP5K1BO14986 540 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ADAMDEC1O15204 470 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 KLF4O43474 513 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 PEX11AO75192 247 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms