RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 MED8Q96G25 268 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CAMK1GQ96NX5 476 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 OR2M2Q96R28 347 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 WACQ9BTA9 647 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 DMRT3Q9NQL9 472 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CYSLTR2Q9NS75 346 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MALT1Q9UDY8 824 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 A4GNTQ9UNA3 340 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 FKBP7Q9Y680 259 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 TMEM131Q92545 1883 aa8.96□□□□□ -0.97
HDAC3-205ENST00000469550 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
HDAC3-205ENST00000469550 PKD1L2Q7Z442 2459 aa8.96□□□□□ -0.97
HDAC3-205ENST00000469550 A0A1B0GVI7 797 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 FLRT2O43155 660 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 AKAP8O43823 692 aaKnown RBP8.96□□□□□ -0.98
HDAC3-205ENST00000469550 EPHX1P07099 455 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 CHRM5P08912 532 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-205ENST00000469550 MMP11P24347 488 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 SOAT1P35610 550 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RAG2P55895 527 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 CTBP2P56545 445 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 TAS2R50P59544 299 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 SNAPC1Q16533 368 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 PRSS53Q2L4Q9 553 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 KCTD20Q7Z5Y7 419 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 ZER1Q7Z7L7 766 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 CDH24Q86UP0 819 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 ADIPOR2Q86V24 386 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 LRRC28Q86X40 367 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-205ENST00000469550 OR8H3Q8N146 312 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 HORMAD2Q8N7B1 307 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF366Q8N895 744 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 POGLUT1Q8NBL1 392 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 FBXO15Q8NCQ5 510 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-205ENST00000469550 OR5M3Q8NGP4 307 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 NEIL3Q8TAT5 605 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 OR5P2Q8WZ92 322 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 NEIL2Q969S2 332 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RFT1Q96AA3 541 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 TMEM19Q96HH6 336 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF607Q96SK3 696 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 JAM3Q9BX67 310 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RSPO3Q9BXY4 272 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-205ENST00000469550 SLC6A16Q9GZN6 736 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RNF32Q9H0A6 362 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 SUV39H2Q9H5I1 410 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 RERGLQ9H628 205 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 CXorf36Q9H7Y0 433 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 DKK4Q9UBT3 224 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 FBXW2Q9UKT8 454 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 ADAMTS20P59510 1910 aa8.96□□□□□ -0.98
HDAC3-205ENST00000469550 SMIM30A4D0T7 59 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 C10orf142B7Z368 130 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TRIM77I1YAP6 450 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 I3L521 148 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 GABRPO00591 440 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 MMP20O60882 483 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TSC22D2O75157 780 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SH3BGRLO75368 114 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 BCHEP06276 602 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 C1GALT1C1LP0DN25 315 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RRASP10301 218 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 PEPDP12955 493 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ELK1P19419 428 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 AHCYP23526 432 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLC1A3P43003 542 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 MTNR1BP49286 362 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SNRPD1P62314 119 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 BDH1Q02338 343 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TAP2Q03519 686 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 HSF2Q03933 536 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 HIST2H2AA3Q6FI13 130 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 FAAH2Q6GMR7 532 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RAET1GQ6H3X3 334 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TYW3Q6IPR3 259 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 FAM122CQ6P4D5 195 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 DEF8Q6ZN54 512 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RFLNAQ6ZTI6 216 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 LUZP2Q86TE4 346 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ADGRG3Q86Y34 549 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 MARCH9Q86YJ5 346 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF655Q8N720 491 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 OR4D11Q8NGI4 311 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 OR52N1Q8NH53 320 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 WFDC5Q8TCV5 224 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SORCS1Q8WY21 1168 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 PHF21AQ96BD5 680 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CCDC120Q96HB5 630 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 LMLNQ96KR4 655 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CDC6Q99741 560 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 THAP7Q9BT49 309 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CPEB1Q9BZB8 566 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 HDHD2Q9H0R4 259 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 GAREM1Q9H706 876 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 MVB12BQ9H7P6 319 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 LIN7BQ9HAP6 207 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms