RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 NFU1Q9UMS0 254 aa10.97□□□□□ -0.65
HDAC3-204ENST00000469207 CUBNO60494 3623 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 RTTNQ86VV8 2226 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 IGLV3-32A0A0A0MS00 114 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 AKAP10O43572 662 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 EFNA2O43921 213 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 SEC22BO75396 215 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 OXSR1O95747 527 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 ACP2P11117 423 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 PRPS2P11908 318 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 PSMA4P25789 261 aaKnown RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 NTSP30990 170 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 MAP3K8P41279 467 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 CTBP2P56545 445 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 PPP2R2BQ00005 443 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 ZNHIT3Q15649 155 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 BEX5Q5H9J7 111 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 CCNJQ5T5M9 372 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 CLEC6AQ6EIG7 209 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 TRIM46Q7Z4K8 759 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 SLC22A9Q8IVM8 553 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 SLC16A11Q8NCK7 471 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 OR6K3Q8NGY3 331 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 TMEM171Q8WVE6 324 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.652e-6■■□□□ 12.5
HDAC3-204ENST00000469207 GIMAP5Q96F15 307 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 GMPPAQ96IJ6 420 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 C16orf45Q96MC5 204 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 RNF145Q96MT1 663 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 ACTR6Q9GZN1 396 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 BAIAP2L1Q9UHR4 511 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 MRTO4Q9UKD2 239 aaKnown RBP10.96□□□□□ -0.65
HDAC3-204ENST00000469207 LAMP3Q9UQV4 416 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 EMC9Q9Y3B6 208 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 CCL27Q9Y4X3 112 aa10.96□□□□□ -0.65
HDAC3-204ENST00000469207 UQCRHLA0A096LP55 91 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 A0A1W2PRB8 838 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 RIPK2O43353 540 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 NDUFB5O43674 189 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 SS18L1O75177 396 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-204ENST00000469207 NKX2-2O95096 273 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 KCNH1O95259 989 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 GPC1P35052 558 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 ATP5J2P56134 94 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 SLC18A2Q05940 514 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF844Q08AG5 666 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 CPTPQ5TA50 214 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 NUFIP2Q7Z417 695 aaKnown RBP10.95□□□□□ -0.66
HDAC3-204ENST00000469207 WDR75Q8IWA0 830 aaKnown RBP10.95□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF619Q8N2I2 560 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 NUP43Q8NFH3 380 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 CLHC1Q8NHS4 586 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 FAM110BQ8TC76 370 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 MZB1Q8WU39 189 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 OSTF1Q92882 214 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF524Q96C55 264 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 TSPYL1Q9H0U9 437 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF701Q9NV72 531 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-204ENST00000469207 MED17Q9NVC6 651 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 HIVEP2P31629 2446 aa10.95□□□□□ -0.66
HDAC3-204ENST00000469207 NPIPA5A0A0B4J1W7 369 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 CCDC151A5D8V7 595 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 ALG1L2C9J202 215 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 NPIPA7E9PJI5 369 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 HS3ST1O14792 307 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 ADAMDEC1O15204 470 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 OIP5O43482 229 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 KCNK2O95069 426 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SOD3P08294 240 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 NPIPA8P0DM63 369 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SFTPDP35247 375 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 GSTM5P46439 218 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 PSMD4P55036 377 aaKnown RBP10.94□□□□□ -0.66
HDAC3-204ENST00000469207 RAC1P63000 192 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 OCRLQ01968 901 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 FGFBP1Q14512 234 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SLC29A2Q14542 456 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 CD226Q15762 336 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 DUSP5Q16690 384 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 WHAMMP3Q1A5X7 153 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 PLPPR5Q32ZL2 321 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 GLE1Q53GS7 698 aaKnown RBP10.94□□□□□ -0.66
HDAC3-204ENST00000469207 HBMQ6B0K9 141 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 Q6ZSR9 355 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 BEND4Q6ZU67 534 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SZRD1Q7Z422 152 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 TUSC5Q8IXB3 177 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF611Q8N823 705 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 OR2T11Q8NH01 316 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 OR2V1Q8NHB1 315 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 ABHD3Q8WU67 409 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 HOXB13Q92826 284 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-204ENST00000469207 CAVIN3Q969G5 261 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 S100PBPQ96BU1 408 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms