RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ATAD3BQ5T9A4 648 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 HEPHL1Q6MZM0 1159 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TCTN3Q6NUS6 607 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 C16orf62Q7Z3J2 963 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MICU2Q8IYU8 434 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CLEC1AQ8NC01 280 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 C11orf65Q8NCR3 313 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 C17orf47Q8NEP4 570 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 NFKBIDQ8NI38 313 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 THAP4Q8WY91 577 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM19Q96HH6 336 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SPATA9Q9BWV2 254 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RUBCNLQ9H714 662 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 A4GALTQ9NPC4 353 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 EXD2Q9NVH0 621 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 THUMPD1Q9NXG2 353 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 EMC3Q9P0I2 261 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MYOTQ9UBF9 498 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CBLCQ9ULV8 474 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ARGFXA6NJG6 315 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF354AO60765 605 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 KCNK2O95069 426 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 H6PDO95479 791 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CHRM4P08173 479 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 OCM2P0CE71 109 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 OCMP0CE72 109 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 NR2F1P10589 423 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 NCK1P16333 377 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 DRD5P21918 477 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PRKAR1BP31321 381 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TRHRP34981 398 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RCVRNP35243 200 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PIGAP37287 484 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CLK3P49761 638 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 DCAF7P61962 342 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 POU6F2P78424 691 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CDK6Q00534 326 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RBBP4Q09028 425 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CDC20Q12834 499 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CHAF1BQ13112 559 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CCDC58Q4VC31 144 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CRTC2Q53ET0 693 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 GPAT3Q53EU6 434 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ANKRD39Q53RE8 183 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RPS26P11Q5JNZ5 115 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ARMC4Q5T2S8 1044 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FCRLBQ6BAA4 426 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ERICH5Q6P6B1 374 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PTRH1Q86Y79 214 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PRR22Q8IZ63 422 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SIRT6Q8N6T7 355 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ANKFN1Q8N957 763 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 OR5L2Q8NGL0 311 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 BRIX1Q8TDN6 353 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FIG4Q92562 907 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ASB9Q96DX5 294 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 THOC3Q96J01 351 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CEP19Q96LK0 163 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FER1L6-AS2Q96M78 137 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MOGAT1Q96PD6 335 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SECISBP2Q96T21 854 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SDF2Q99470 211 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 BTBD2Q9BX70 525 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MARCH7Q9H992 704 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 POMPQ9Y244 141 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SSUH2Q9Y2M2 353 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RBMX2Q9Y388 322 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PIEZO2Q9H5I5 2752 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 NBEAQ8NFP9 2946 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 C5orf58C9J3I9 102 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ARPC2O15144 300 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SLC28A2O43868 658 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MAN1A2O60476 641 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 FCMRO60667 390 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 OR2J2O76002 312 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SOX30O94993 753 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 IGKV1D-16P01601 117 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SERPINA7P05543 415 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 GGT1P19440 569 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ABCD3P28288 659 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PCGF2P35227 344 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 PTGS2P35354 604 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ST13P50502 369 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CRISP3P54108 245 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MRPS22P82650 360 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TAGLNQ01995 201 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 AIMP2Q13155 320 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 VEZF1Q14119 521 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SF3B4Q15427 424 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■□□□□ 10.2
SCAF4-204ENST00000467731 ZNF630Q2M218 657 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ARHGAP11BQ3KRB8 267 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 REEP3Q6NUK4 255 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 KBTBD2Q8IY47 623 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms