RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 TRAPPC13A5PLN9 417 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 CNOT3O75175 753 aaKnown RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 CYP7B1O75881 506 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 COX10Q12887 443 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 NPRL3Q12980 569 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 PIN1Q13526 163 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 ENTPD8Q5MY95 495 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 PODNL1Q6PEZ8 512 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 ZNF613Q6PF04 617 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 LANCL3Q6ZV70 420 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 CPEB2Q7Z5Q1 589 aaKnown RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 HMGN2P46Q86SG4 172 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 SLCO6A1Q86UG4 719 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 PRSS58Q8IYP2 241 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 ZNF321PQ8N8H1 164 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 AQP11Q8NBQ7 271 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 OR4N2Q8NGD1 307 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 NUBPLQ8TB37 319 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 VMP1Q96GC9 406 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 MUS81Q96NY9 551 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 CRB3Q9BUF7 120 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 MRPS26Q9BYN8 205 aaKnown RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 UCK2Q9BZX2 261 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 TRIM2Q9C040 744 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 NXF5Q9H1B4 397 aaKnown RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 EXOSC3Q9NQT5 275 aaKnown RBP8.72□□□□□ -1.01
PRPF3-202ENST00000467329 UBQLN4Q9NRR5 601 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 RHCGQ9UBD6 479 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 RALGAPA1Q6GYQ0 2036 aa8.72□□□□□ -1.01
PRPF3-202ENST00000467329 CCDC187A0A096LP49 1063 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 C4orf47A7E2U8 309 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 TPST2O60704 377 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 SMIM18P0DKX4 95 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 ZNF28P17035 718 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 GSTM3P21266 225 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 TBXA2RP21731 343 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 NBL1P41271 181 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 CLK3P49761 638 aaKnown RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 APOFQ13790 326 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 SEC23BQ15437 767 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 KLHL26Q53HC5 615 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 RBM48Q5RL73 367 aaKnown RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 PDZK1Q5T2W1 519 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 PGBD2Q6P3X8 592 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 TTC33Q6PID6 262 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 GALNT5Q7Z7M9 940 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 TSPYL5Q86VY4 417 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 FAM71CQ8NEG0 241 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 OR9Q2Q8NGE9 314 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 WDR36Q8NI36 951 aaKnown RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 SLC7A13Q8TCU3 470 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 ACOT11Q8WXI4 607 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 HDAC2Q92769 488 aaKnown RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 SLC41A3Q96GZ6 507 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 HRASLS5Q96KN8 279 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 CCNL2Q96S94 520 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 ULBP3Q9BZM4 244 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 RLIMQ9NVW2 624 aa8.71□□□□□ -1.01
PRPF3-202ENST00000467329 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 TUBA8Q9NY65 449 aaPredicted RBP8.71□□□□□ -1.01
PRPF3-202ENST00000467329 A0A1W2PQD3 144 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 SERINC4A6NH21 518 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 TRIM64CA6NLI5 447 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 CSO75390 466 aaKnown RBP8.71□□□□□ -1.02
PRPF3-202ENST00000467329 DKK1O94907 266 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 DLGAP3O95886 979 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 MT-CO3P00414 261 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 RAB40ALP0C0E4 278 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 GGT2P36268 569 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 TPD52P55327 224 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-202ENST00000467329 TUBA4AP68366 448 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 NCF4Q15080 339 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 FNDC7Q5VTL7 733 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 LCN10Q6JVE6 187 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 C1orf94Q6P1W5 598 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 PAPD4Q6PIY7 484 aaKnown RBP8.71□□□□□ -1.02
PRPF3-202ENST00000467329 RAB11FIP2Q7L804 512 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 OR4K5Q8NGD3 323 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 GNPDA2Q8TDQ7 276 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 MR1Q95460 341 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 ZNF566Q969W8 418 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 LPAR4Q99677 370 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 PARD6AQ9NPB6 346 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 KRCC1Q9NPI7 259 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-202ENST00000467329 PCDHGB5Q9Y5G0 923 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 GMPPBQ9Y5P6 360 aa8.71□□□□□ -1.02
PRPF3-202ENST00000467329 NPIPA5A0A0B4J1W7 369 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 NPIPA7E9PJI5 369 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 TSPAN2O60636 221 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 LYPD3O95274 346 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 NPIPA8P0DM63 369 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 OSMP13725 252 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 NAGAP17050 411 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 TGM1P22735 817 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 KRT20P35900 424 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 PNLIPRP2P54317 469 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 CXCR4P61073 352 aa8.7□□□□□ -1.02
PRPF3-202ENST00000467329 PLAURQ03405 335 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms