RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GRAMD1BQ3KR37 738 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 EXOSC6Q5RKV6 272 aaKnown RBP10.83□□□□□ -0.68
UBR4-211ENST00000467272 CPTPQ5TA50 214 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 LGSNQ5TDP6 509 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 C11orf71Q6IPW1 123 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 SPATA4Q8NEY3 305 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 KBTBD8Q8NFY9 601 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 OR4C3Q8NH37 302 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 FAM110BQ8TC76 370 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 ZBTB8AQ96BR9 441 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 ELP4Q96EB1 424 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 APIPQ96GX9 242 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 ACSS3Q9H6R3 686 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
UBR4-211ENST00000467272 BARX1Q9HBU1 254 aaPredicted RBP10.83□□□□□ -0.68
UBR4-211ENST00000467272 GP6Q9HCN6 339 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 FANCFQ9NPI8 374 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 DMGDHQ9UI17 866 aaKnown RBP10.83□□□□□ -0.68
UBR4-211ENST00000467272 MCTS1Q9ULC4 181 aaKnown RBP10.83□□□□□ -0.68
UBR4-211ENST00000467272 B3GALT5Q9Y2C3 310 aa10.83□□□□□ -0.68
UBR4-211ENST00000467272 PKD1L1Q8TDX9 2849 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 A0A1W2PRB8 838 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 GXYLT2A0PJZ3 443 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 PLGP00747 810 aaPredicted RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 LINGO3P0C6S8 592 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TSPAN8P19075 237 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TIA1P31483 386 aaKnown RBP eCLIP10.82□□□□□ -0.68
UBR4-211ENST00000467272 ARL1P40616 181 aaPredicted RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 GSTM5P46439 218 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 HTR6P50406 440 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 ZNF155Q12901 538 aaPredicted RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 P2RY6Q15077 328 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TSC22D1Q15714 1073 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 ZNF239Q16600 458 aaKnown RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 SPIN4Q56A73 249 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 FAM71E1Q6IPT2 247 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TMEM107Q6UX40 140 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 NUFIP2Q7Z417 695 aaKnown RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 STK32CQ86UX6 486 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TDRPQ86YL5 185 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 ROBO4Q8WZ75 1007 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 AMDHD1Q96NU7 426 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 TNFRSF13CQ96RJ3 184 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 ZNF382Q96SR6 550 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 NAPGQ99747 312 aaPredicted RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 MRPL57Q9BQC6 102 aaKnown RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 TACO1Q9BSH4 297 aaKnown RBP10.82□□□□□ -0.68
UBR4-211ENST00000467272 VPS11Q9H270 941 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 GLIPR2Q9H4G4 154 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 Q9N2J8 555 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 ZDHHC18Q9NUE0 388 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 FBXO34Q9NWN3 711 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 NTMQ9P121 344 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 KLHL13Q9P2N7 655 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 GRID1Q9ULK0 1009 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 SNX8Q9Y5X2 465 aa10.82□□□□□ -0.68
UBR4-211ENST00000467272 A0A1W2PP18 115 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 TTC36A6NLP5 189 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 TNFSF11O14788 317 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 CLOCKO15516 846 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 RAMP1O60894 148 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 SMIM24O75264 130 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 ULK1O75385 1050 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 NKX2-2O95096 273 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 NTN1O95631 604 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 SHC1P29353 583 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 PAFAH1B1P43034 410 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 MANFP55145 182 aaKnown RBP10.81□□□□□ -0.68
UBR4-211ENST00000467272 CLCQ05315 142 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 TSNAXIP1Q2TAA8 658 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 UNC50Q53HI1 259 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 TRABD2AQ86V40 505 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 RELL1Q8IUW5 271 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 CDYL2Q8N8U2 506 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 ABHD3Q8WU67 409 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 OSTF1Q92882 214 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 GTPBP3Q969Y2 492 aaKnown RBP10.81□□□□□ -0.68
UBR4-211ENST00000467272 RNF145Q96MT1 663 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 SRXN1Q9BYN0 137 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 PRRG4Q9BZD6 226 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 TBL1XR1Q9BZK7 514 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 MRPL46Q9H2W6 279 aaKnown RBP10.81□□□□□ -0.68
UBR4-211ENST00000467272 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 PFDN4Q9NQP4 134 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 GIMAP4Q9NUV9 329 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 STOML1Q9UBI4 398 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 VDAC3Q9Y277 283 aa10.81□□□□□ -0.68
UBR4-211ENST00000467272 ALPK2Q86TB3 2170 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 GNG14A0A1W2PPG7 69 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 PGM3O95394 542 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 ESRRBO95718 433 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 OXSR1O95747 527 aaPredicted RBP10.8□□□□□ -0.68
UBR4-211ENST00000467272 KRT6AP02538 564 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 OPN1LWP04000 364 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 KRT6BP04259 564 aa10.8□□□□□ -0.68
UBR4-211ENST00000467272 JUNP05412 331 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms