RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ACP2P11117 423 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF17P17021 662 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 EIF1AXP47813 144 aaKnown RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 PCLAFQ15004 111 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 GUSBP1Q15486 140 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 RFTN2Q52LD8 501 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 SHEQ5VZ18 495 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF550Q7Z398 422 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 BIVMQ86UB2 503 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 GATSQ8NAP1 163 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 LRRN4CLQ8ND94 238 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 GIMAP5Q96F15 307 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 ZC3HAV1LQ96H79 300 aaKnown RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 C18orf12Q96KH6 178 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 MS4A4EQ96PG1 132 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 GATA5Q9BWX5 397 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 PRRG4Q9BZD6 226 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 TUBB1Q9H4B7 451 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 BAIAP2L1Q9UHR4 511 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 NGFRP08138 427 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 FRKP42685 505 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-206ENST00000466532 SLC18A2Q05940 514 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 PDE7AQ13946 482 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 GALNTL6Q49A17 601 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 KANK2Q63ZY3 851 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 FIGNL1Q6PIW4 674 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 RNF165Q6ZSG1 346 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 FAM214BQ7L5A3 538 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 EIF1ADQ8N9N8 165 aaKnown RBP17.2■□□□□ 0.34
COL9A3-206ENST00000466532 SLC16A11Q8NCK7 471 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 OR4C3Q8NH37 302 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 SMR3AQ99954 134 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 TRMOQ9BU70 441 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 UBTD1Q9HAC8 227 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 HHATLQ9HCP6 504 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-206ENST00000466532 NTMQ9P121 344 aa17.2■□□□□ 0.34
COL9A3-206ENST00000466532 A0A087WZY1 265 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 LSM1O15116 133 aaKnown RBP17.19■□□□□ 0.34
COL9A3-206ENST00000466532 TRIM13O60858 407 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 KCNK2O95069 426 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 ALOX5P09917 674 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-206ENST00000466532 TBXA2RP21731 343 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 ADSLP30566 484 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-206ENST00000466532 SLC6A8P48029 635 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 DUSP5Q16690 384 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL9A3-206ENST00000466532 EXOC3L2Q2M3D2 409 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 MFSD12Q6NUT3 480 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 ZAR1Q86SH2 424 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 WDR75Q8IWA0 830 aaKnown RBP17.19■□□□□ 0.34
COL9A3-206ENST00000466532 DDIASQ8IXT1 998 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 OR6Y1Q8NGX8 325 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 OR10D3Q8NH80 312 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 FAM110BQ8TC76 370 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 PIGTQ969N2 578 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 PIP5K1AQ99755 562 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 KLHL4Q9C0H6 718 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 CLEC4AQ9UMR7 237 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 TMED5Q9Y3A6 229 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 EMC9Q9Y3B6 208 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 DNAJC15Q9Y5T4 150 aa17.19■□□□□ 0.34
COL9A3-206ENST00000466532 ARHGEF9O43307 516 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 SMPD2O60906 423 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 PLGP00747 810 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 INHBBP09529 407 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 HPGDP15428 266 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 ASMTP46597 345 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 ZNF41P51814 821 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 ACKR1Q16570 336 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 Q5PR19 223 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 ANKRD34AQ69YU3 496 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 P3H2Q8IVL5 708 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 GTPBP8Q8N3Z3 284 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 COX18Q8N8Q8 333 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 JADE3Q92613 823 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 ZBTB8AQ96BR9 441 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 MTERF3Q96E29 417 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 OTUB1Q96FW1 271 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 C16orf58Q96GQ5 468 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 SH3YL1Q96HL8 342 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 NPAS1Q99742 590 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 FBXO34Q9NWN3 711 aa17.18■□□□□ 0.34
COL9A3-206ENST00000466532 PAQR5Q9NXK6 330 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 MCTS1Q9ULC4 181 aaKnown RBP17.18■□□□□ 0.34
COL9A3-206ENST00000466532 A0A1W2PRB8 838 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 TMEM233B4DJY2 109 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 SCDO00767 359 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 OPN1LWP04000 364 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 CHRNGP07510 517 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 BCKDHAP12694 445 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 FPR1P21462 350 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 LCN1P31025 176 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 SERPINB4P48594 390 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 PRIM2P49643 509 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 CTBP2P56545 445 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 PLPPR5Q32ZL2 321 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 CCNJQ5T5M9 372 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms