RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 QSOX2Q6ZRP7 698 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 AHSA2Q719I0 299 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 MFSD4AQ8N468 514 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 OR10G2Q8NGC3 310 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 OR52R1Q8NGF1 315 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 OR56A1Q8NGH5 318 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 OR4C15Q8NGM1 316 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 SPPL2AQ8TCT8 520 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 SFXN5Q8TD22 340 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 PTPMT1Q8WUK0 201 aaPredicted RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 LGALS12Q96DT0 336 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 DEPDC7Q96QD5 511 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 COPS4Q9BT78 406 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 FKBP14Q9NWM8 211 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 NDUFAF4Q9P032 175 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 FOXJ2Q9P0K8 574 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 NTMQ9P121 344 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 PSORS1C1Q9UIG5 152 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 C19orf53Q9UNZ5 99 aaPredicted RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 BLACEA4D250 179 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 PLOD3O60568 738 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 STK17BO94768 372 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 CD36P16671 472 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 TNNI3P19429 210 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 MAN2A2P49641 1150 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 VBP1P61758 197 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 SYPL1Q16563 259 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 MED25Q71SY5 747 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 ZBTB8BQ8NAP8 495 aaPredicted RBP17.27■□□□□ 0.35
CAPN3-209ENST00000466222 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 SLC9A6Q92581 669 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 MR1Q95460 341 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 CNPPD1Q9BV87 410 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 TGIF2Q9GZN2 237 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 RASSF1Q9NS23 344 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 PTGFRNQ9P2B2 879 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 OSGIN1Q9UJX0 560 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 DTX4Q9Y2E6 619 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 A3GALT2U3KPV4 340 aa17.27■□□□□ 0.35
CAPN3-209ENST00000466222 IDSB3KWA1 339 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 MAN1A2O60476 641 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 BCHEP06276 602 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 EPHA2P29317 976 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 LIMK1P53667 647 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 MAP4K2Q12851 820 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 SCARB2Q14108 478 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 DGCR6Q14129 220 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 INAQ16352 499 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 CRB2Q5IJ48 1285 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 MFSD12Q6NUT3 480 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 TIPARPQ7Z3E1 657 aaKnown RBP17.26■□□□□ 0.35
CAPN3-209ENST00000466222 HMGN2P46Q86SG4 172 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 RHOXF1Q8NHV9 184 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF675Q8TD23 568 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 OR7D2Q96RA2 312 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 SPSB2Q99619 263 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 SELENONQ9NZV5 590 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 AASSQ9UDR5 926 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 ERVK-19Q9WJR5 959 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 MMACHCQ9Y4U1 282 aa17.26■□□□□ 0.35
CAPN3-209ENST00000466222 TCRBV16S1A1N1A0A5B0 115 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 VSTM2BA6NLU5 285 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 EFCAB9A8MZ26 197 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 C17orf105B2RV13 164 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 CDK1P06493 297 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 CDK6Q00534 326 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 FUT5Q11128 374 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 MICAQ29983 383 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 MRPL14Q6P1L8 145 aaKnown RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 BHLHB9Q6PI77 547 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 TSEN54Q7Z6J9 526 aaKnown RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 GEMIN6Q8WXD5 167 aaKnown RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 ZHX1-C8orf76Q96EF9 292 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 SLC35A4Q96G79 324 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 TAAR9Q96RI9 348 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 FEVQ99581 238 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 RSPO3Q9BXY4 272 aaPredicted RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 SLIRPQ9GZT3 109 aaKnown RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 A0A087WV62 115 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 CCDC187A0A096LP49 1063 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 ARRDC5A6NEK1 342 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 CLCA1A8K7I4 914 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 BOLA2-SMG1P6H3BVE0 249 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 SLC34A2O95436 690 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 ONECUT2O95948 504 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 OPN1SWP03999 348 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 KLK3P07288 261 aaPredicted RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 NOVA1P51513 510 aaKnown RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 NCS1P62166 190 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 SERTAD2Q14140 314 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 ARMC8Q8IUR7 673 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 TAMM41Q96BW9 452 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 MOAP1Q96BY2 351 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 TMEM19Q96HH6 336 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 SENP5Q96HI0 755 aaPredicted RBP17.25■□□□□ 0.35
CAPN3-209ENST00000466222 DACH2Q96NX9 599 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 MS4A4EQ96PG1 132 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 BTBD2Q9BX70 525 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 MMP27Q9H306 513 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms