RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 DAPP1Q9UN19 280 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 TRAPPC13A5PLN9 417 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 SOCS6O14544 535 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 THBS1P07996 1170 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 CPMP14384 443 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 BMP7P18075 431 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 EEF1A1P68104 462 aaKnown RBP17.06■□□□□ 0.32
SYNE4-204ENST00000465425 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 TRMT12Q53H54 448 aaKnown RBP17.06■□□□□ 0.32
SYNE4-204ENST00000465425 CNIH2Q6PI25 160 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 PARM1Q6UWI2 310 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 Q8N402 240 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 FANK1Q8TC84 345 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 DCLRE1CQ96SD1 692 aaKnown RBP17.06■□□□□ 0.32
SYNE4-204ENST00000465425 CD180Q99467 661 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 OR52D1Q9H346 318 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 POLHQ9Y253 713 aa17.06■□□□□ 0.32
SYNE4-204ENST00000465425 CENPVL1A0A0U1RR11 272 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 UNC119BA6NIH7 251 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 CENPXA8MT69 81 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 SEC14L5O43304 696 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 HPGDSO60760 199 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 DDOSTP39656 456 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 IFITM2Q01629 132 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ID2Q02363 134 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 RUNX2Q13950 521 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 IL18Q14116 193 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 PLBD1Q6P4A8 553 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 MZT2AQ6P582 158 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 SMARCD3Q6STE5 483 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF322Q6U7Q0 402 aaPredicted RBP17.05■□□□□ 0.32
SYNE4-204ENST00000465425 USP53Q70EK8 1073 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ABHD13Q7L211 337 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 SIRT6Q8N6T7 355 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 FGF14Q92915 247 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 OR2A5Q96R48 311 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 PIGUQ9H490 435 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 MALT1Q9UDY8 824 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 NDRG2Q9UN36 371 aaKnown RBP17.05■□□□□ 0.32
SYNE4-204ENST00000465425 HMX3A6NHT5 357 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 CD8B2A6NJW9 211 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 A8MV72 311 aaPredicted RBP17.05■□□□□ 0.32
SYNE4-204ENST00000465425 RFXAPO00287 272 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 P2RX6O15547 441 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 STX11O75558 287 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 CSF2P04141 144 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 CD8BP10966 210 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 APEX1P27695 318 aaKnown RBP17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF136P52737 540 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 PRRT3Q5FWE3 981 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 C7orf61Q8IZ16 206 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF619Q8N2I2 560 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 OR10G6Q8NH81 332 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 CCL4L1Q8NHW4 92 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 TSACCQ96A04 125 aaPredicted RBP17.05■□□□□ 0.32
SYNE4-204ENST00000465425 FAM131CQ96AQ9 280 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ST6GAL2Q96JF0 529 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 FRMD6Q96NE9 622 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF649Q9BS31 505 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF350Q9GZX5 532 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 ASB6Q9NWX5 421 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 SLC22A7Q9Y694 548 aa17.05■□□□□ 0.32
SYNE4-204ENST00000465425 LRRC72A6NJI9 287 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 H0Y8X5 98 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 HCN1O60741 890 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 CTSVO60911 334 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 NCR1O76036 304 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 DBIP07108 87 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 GKN3PP0CG01 181 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 TRAPPC2P0DI81 140 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 TRAPPC2BP0DI82 140 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 CFL1P23528 166 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 MYL9P24844 172 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 INSL4Q14641 139 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 DCST2Q5T1A1 773 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 ACBD7Q8N6N7 88 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 CAMKVQ8NCB2 501 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 BRIX1Q8TDN6 353 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 DNAJA4Q8WW22 397 aaPredicted RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 TM4SF19Q96DZ7 209 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 DMRTB1Q96MA1 342 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 MYADMQ96S97 322 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 ATF6BQ99941 703 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 KCNN2Q9H2S1 579 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 RNF121Q9H920 327 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 SIDT1Q9NXL6 827 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 XIRP2A4UGR9 3374 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 C2orf92A0A1B0GVN3 265 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF860A6NHJ4 632 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 C12orf71A8MTZ7 269 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 B4DXG7 233 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 HOXB2P14652 356 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 POLR2CP19387 275 aaPredicted RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 NFATC4Q14934 902 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 QPRTQ15274 297 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms