RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CSNK1A1LQ8N752 337 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 IL1F10Q8WWZ1 152 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 VPS39Q96JC1 886 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 CASD1Q96PB1 797 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 TM2D1Q9BX74 207 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 CALHM2Q9HA72 323 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 PALMDQ9NP74 551 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 MRPL39Q9NYK5 338 aaKnown RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 CGNQ9P2M7 1197 aaKnown RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 SLC2A6Q9UGQ3 507 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 GSAPA4D1B5 854 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 A8MUI8 341 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 NOL4O94818 638 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 DUSP14O95147 198 aaKnown RBP3.1□□□□□ -1.91
CLK1-208ENST00000464454 OPN1LWP04000 364 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CLUP10909 449 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ATP5A1P25705 553 aaKnown RBP3.1□□□□□ -1.91
CLK1-208ENST00000464454 RND3P61587 244 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CXCL6P80162 114 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 RGS1Q08116 209 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CD47Q08722 323 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ZNF154Q13106 437 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ASAH1Q13510 395 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 SERTAD2Q14140 314 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ATXN7L3Q14CW9 347 aaPredicted RBP3.1□□□□□ -1.91
CLK1-208ENST00000464454 TGIF1Q15583 401 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CHI3L2Q15782 390 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 MAPK6Q16659 721 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 USH1GQ495M9 461 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CELF3Q5SZQ8 465 aaKnown RBP3.1□□□□□ -1.91
CLK1-208ENST00000464454 SLC22A10Q63ZE4 541 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 SLC25A24Q6NUK1 477 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 BLOC1S2Q6QNY1 142 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ARMCX2Q7L311 632 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 DPY19L4Q7Z388 723 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 TMEM17Q86X19 198 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CCDC26Q8TAB7 109 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 MYLPFQ96A32 169 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 RAB7BQ96AH8 199 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 C4orf36Q96KX1 117 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 GLT8D2Q9H1C3 349 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 RHOJQ9H4E5 214 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 SMC3Q9UQE7 1217 aa3.1□□□□□ -1.91
CLK1-208ENST00000464454 CFAP65Q6ZU64 1925 aaKnown RBP3.09□□□□□ -1.91
CLK1-208ENST00000464454 ESYT2A0FGR8 921 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 E9PLD3 99 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 CTAGE5O15320 804 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 STX7O15400 261 aaKnown RBP3.09□□□□□ -1.91
CLK1-208ENST00000464454 PDHBP11177 359 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 DRD5P21918 477 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 IGHV1-2P23083 117 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ADSSP30520 456 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 NF2P35240 595 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 MAGEA5P43359 124 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ERVPABLB-1P60509 514 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.91
CLK1-208ENST00000464454 GSG1Q2KHT4 349 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 QRICH1Q2TAL8 776 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 SLC36A3Q495N2 470 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 GLYR1Q49A26 553 aaPredicted RBP3.09□□□□□ -1.91
CLK1-208ENST00000464454 NADK2Q4G0N4 442 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 CGB2Q6NT52 195 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ZNF584Q8IVC4 421 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 C9orf40Q8IXQ3 194 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 KLHL30-AS1Q8NEE0 82 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 CNIH3Q8TBE1 160 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 NANPQ8TBE9 248 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 TMEM80Q96HE8 168 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 SIGLEC12Q96PQ1 595 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ABCD2Q9UBJ2 740 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ANAPC7Q9UJX3 599 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 L3MBTL1Q9Y468 752 aa3.09□□□□□ -1.91
CLK1-208ENST00000464454 ATP10DQ9P241 1426 aa3.09□□□□□ -1.92
CLK1-208ENST00000464454 IGHV3-35A0A0C4DH35 117 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 A0A1W2PQ72 361 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 SAGE2PA6NJ88 616 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 OR6C65A6NJZ3 312 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 A8MU10 97 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PPIAL4DF5H284 164 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 NUDT21O43809 227 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 TBX19O60806 448 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 TSC22D2O75157 780 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 B3GAT3O94766 335 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 UFL1O94874 794 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 IGF1P05019 195 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 ATP6V1C1P21283 382 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PTBP1P26599 531 aaKnown RBP eCLIP3.08□□□□□ -1.92
CLK1-208ENST00000464454 GDF1P27539 372 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 MDH2P40926 338 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 DHPSP49366 369 aaPredicted RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 HSD17B7P56937 341 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 VLDLRP98155 873 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 SNTB2Q13425 540 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 DPYSL3Q14195 570 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PAN3Q58A45 887 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 RABGAP1LQ5R372 815 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 FAM120AOSQ5T036 256 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 UTF1Q5T230 341 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 RSBN1Q5VWQ0 802 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms