RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 IL4I1Q96RQ9 567 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ARHGDIGQ99819 225 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC25A19Q9HC21 320 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF304Q9HCX3 659 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 APMAPQ9HDC9 416 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 PRTFDC1Q9NRG1 225 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ETAA1Q9NY74 926 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 LIPT1Q9Y234 373 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CHST2Q9Y4C5 530 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ADAMTS20P59510 1910 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 OR2W5A6NFC9 320 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 EFCAB7A8K855 629 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 EFCAB9A8MZ26 197 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 H3BN98 237 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SYT5O00445 386 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CTNSO60931 367 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ENTPD6O75354 484 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SCRG1O75711 98 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 NADKO95544 446 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 MMP11P24347 488 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 NBL1P41271 181 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 BTG2P78543 158 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ALDH6A1Q02252 535 aaKnown RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 DGUOKQ16854 277 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF311Q5JNZ3 666 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 TMEM201Q5SNT2 666 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 HEPHL1Q6MZM0 1159 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 MFSD12Q6NUT3 480 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CD300LDQ6UXZ3 194 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 C16orf62Q7Z3J2 963 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC46A3Q7Z3Q1 461 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC38A9Q8NBW4 561 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 LGALS12Q96DT0 336 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 SH3YL1Q96HL8 342 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 MS4A4EQ96PG1 132 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 CALML5Q9NZT1 146 aa13.48□□□□□ -0.25
COL5A1-205ENST00000464187 GPR55Q9Y2T6 319 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-205ENST00000464187 FRS3O43559 492 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 PIPP12273 146 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-205ENST00000464187 FBLP22087 321 aaKnown RBP13.47□□□□□ -0.25
COL5A1-205ENST00000464187 GADD45AP24522 165 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 IDUAP35475 653 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 HSD17B7P56937 341 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 STX4Q12846 297 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 TMED1Q13445 227 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 ATAD3BQ5T9A4 648 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 CDC73Q6P1J9 531 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 SIMC1Q8NDZ2 872 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 C9orf43Q8TAL5 461 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-205ENST00000464187 VMP1Q96GC9 406 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 CRELD1Q96HD1 420 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 OR1F2PQ96R84 312 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 CDC6Q99741 560 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 GPA33Q99795 319 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 CTRCQ99895 268 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 CDCA4Q9BXL8 241 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 AKIP1Q9NQ31 210 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 DNAJC27Q9NZQ0 273 aa13.47□□□□□ -0.25
COL5A1-205ENST00000464187 TGFBR3LH3BV60 316 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 POLR1CO15160 346 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-205ENST00000464187 MAGEB3O15480 346 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 AIREO43918 545 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 SLC35E2P0CK97 266 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 MAOAP21397 527 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 NT5EP21589 574 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 GRK5P34947 590 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 SOX18P35713 384 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 IL11RAQ14626 422 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF628Q5EBL2 1059 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ARHGAP40Q5TG30 622 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 C1orf94Q6P1W5 598 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 C16orf87Q6PH81 154 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 CASP12Q6UXS9 341 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 FRRS1Q6ZNA5 592 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 Q6ZNX1 250 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ADCK1Q86TW2 530 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 IGFN1Q86VF2 1251 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-205ENST00000464187 LINC00471Q8N535 108 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 BMPERQ8N8U9 685 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 SLC16A11Q8NCK7 471 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ADAMTS15Q8TE58 950 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 DOK4Q8TEW6 326 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 CDS1Q92903 461 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 CLIP3Q96DZ5 547 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 IRF2BPLQ9H1B7 796 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 OSGIN1Q9UJX0 560 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms