RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 DNAJC14Q6Y2X3 702 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-210ENST00000464078 ESPNLQ6ZVH7 1005 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 GALNT10Q86SR1 603 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 LCA5Q86VQ0 697 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 OR2V1Q8NHB1 315 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 LILRB1Q8NHL6 650 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-210ENST00000464078 ACTRT2Q8TDY3 377 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 DCAKDQ8WVC6 231 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 FBXW5Q969U6 566 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 TRMT61AQ96FX7 289 aaKnown RBP15.43■□□□□ 0.06
HMGN1-210ENST00000464078 GLIPR2Q9H4G4 154 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 GRPEL1Q9HAV7 217 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 LRTM1Q9HBL6 345 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 PLCE1Q9P212 2302 aa15.43■□□□□ 0.06
HMGN1-210ENST00000464078 CD5LO43866 347 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 CXCL13O43927 109 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 DLX3O60479 287 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-210ENST00000464078 IGKV1D-16P01601 117 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 TP53P04637 393 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-210ENST00000464078 SOD3P08294 240 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 IMPDH1P20839 514 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 IDUAP35475 653 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 MAP3K8P41279 467 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 RFX3P48380 749 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 SLC7A5Q01650 507 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 C2orf80Q0P641 193 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 PLPPR5Q32ZL2 321 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 C8orf74Q6P047 294 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 PODNL1Q6PEZ8 512 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 IKBIPQ70UQ0 350 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 HIPK1Q86Z02 1210 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 GABRG1Q8N1C3 465 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 FAM76AQ8TAV0 307 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 RAB3IL1Q8TBN0 382 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 S100PBPQ96BU1 408 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 L3HYPDHQ96EM0 354 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 TACO1Q9BSH4 297 aaKnown RBP15.42■□□□□ 0.06
HMGN1-210ENST00000464078 HDHD5Q9BXW7 423 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 TSPYL1Q9H0U9 437 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 SLCO5A1Q9H2Y9 848 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 NGBQ9NPG2 151 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 SNX8Q9Y5X2 465 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 FREM1Q5H8C1 2179 aa15.42■□□□□ 0.06
HMGN1-210ENST00000464078 CUBNO60494 3623 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 RNF212BA8MTL3 300 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 PABPC4LP0CB38 370 aaKnown RBP15.41■□□□□ 0.06
HMGN1-210ENST00000464078 ATP5F1P24539 256 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-210ENST00000464078 GABRA3P34903 492 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 SLC29A2Q14542 456 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 NCMAPQ5T1S8 102 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 GTF2IRD2BQ6EKJ0 949 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 HMBOX1Q6NT76 420 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 GTF2IRD2Q86UP8 949 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 SLC22A9Q8IVM8 553 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 MAPK1IP1LQ8NDC0 245 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 RNF128Q8TEB7 428 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 ZNF764Q96H86 408 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-210ENST00000464078 ESRP2Q9H6T0 727 aaKnown RBP15.41■□□□□ 0.06
HMGN1-210ENST00000464078 GP6Q9HCN6 339 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 TIMM22Q9Y584 194 aa15.41■□□□□ 0.06
HMGN1-210ENST00000464078 A0A0J9YW62 118 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 A0A1W2PRB8 838 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 GXYLT2A0PJZ3 443 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 NDUFB5O43674 189 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 GMFGO60234 142 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 NKX2-2O95096 273 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 OXSR1O95747 527 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 IFNA2P01563 188 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 CD3EP07766 207 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 ME2P23368 584 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 ZNF41P51814 821 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 PRKAA2P54646 552 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 ZNF239Q16600 458 aaKnown RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 VPS26BQ4G0F5 336 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 GLE1Q53GS7 698 aaKnown RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 TEX35Q5T0J7 233 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 CPTPQ5TA50 214 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 HBMQ6B0K9 141 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 MFSD12Q6NUT3 480 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 SEZ6L2Q6UXD5 910 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 TFAP2EQ6VUC0 442 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 PHC2Q8IXK0 858 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 CDC26Q8NHZ8 85 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 SMAP2Q8WU79 429 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 SLC9A6Q92581 669 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 RNF145Q96MT1 663 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 KCNA7Q96RP8 456 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 NPAS1Q99742 590 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 USB1Q9BQ65 265 aaKnown RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 MED17Q9NVC6 651 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 TMEM216Q9P0N5 145 aa15.4■□□□□ 0.06
HMGN1-210ENST00000464078 MAGED1Q9Y5V3 778 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-210ENST00000464078 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
HMGN1-210ENST00000464078 TNFSF11O14788 317 aa15.39■□□□□ 0.05
HMGN1-210ENST00000464078 IGHV4-39P01824 125 aa15.39■□□□□ 0.05
HMGN1-210ENST00000464078 ELK4P28324 431 aa15.39■□□□□ 0.05
HMGN1-210ENST00000464078 ADH6P28332 368 aa15.39■□□□□ 0.05
HMGN1-210ENST00000464078 LCN1P31025 176 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms