RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NGFRP08138 427 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 NPIPA8P0DM63 369 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 H2AFXP16104 143 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 CHMP24386 653 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 MSX1P28360 303 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 SOAT1P35610 550 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 TIMP3P35625 211 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 RNF144AP50876 292 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 ZNF136P52737 540 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 DGKQP52824 942 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 TPD52P55327 224 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 CD226Q15762 336 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 FAM174BQ3ZCQ3 159 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 C6orf120Q7Z4R8 191 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 ADGRE4PQ86SQ3 457 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 LACC1Q8IV20 430 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 C9orf106Q8NAJ2 232 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 SFXN5Q8TD22 340 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 OR7D2Q96RA2 312 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 TREX2Q9BQ50 279 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 UBQLN4Q9NRR5 601 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 FAF1Q9UNN5 650 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 ZNF337Q9Y3M9 751 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 PRSS51A0A1B0GVH4 220 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 KLF11O14901 512 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 NDUFB5O43674 189 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 ZNF708P17019 499 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 HK1P19367 917 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 CLK3P49761 638 aaKnown RBP11.73□□□□□ -0.53
XRN1-203ENST00000463916 AGFG1P52594 562 aaKnown RBP11.73□□□□□ -0.53
XRN1-203ENST00000463916 AAGABQ6PD74 315 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 ENPP6Q6UWR7 440 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
XRN1-203ENST00000463916 OLIG3Q7RTU3 272 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 RELL2Q8NC24 303 aaPredicted RBP11.73□□□□□ -0.53
XRN1-203ENST00000463916 OR4A15Q8NGL6 344 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 ADAMTS15Q8TE58 950 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 MAELQ96JY0 434 aaKnown RBP11.73□□□□□ -0.53
XRN1-203ENST00000463916 MARK4Q96L34 752 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 OR52B2Q96RD2 323 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 SPOCK3Q9BQ16 436 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 CALHM2Q9HA72 323 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 POLQO75417 2590 aa11.73□□□□□ -0.53
XRN1-203ENST00000463916 OR2M5A3KFT3 312 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 HSPB2A8KAH6 182 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 E9PBE3 544 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 CPSF4O95639 269 aaKnown RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 BMP5P22003 454 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 SUCLG1P53597 346 aaKnown RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 DLX5P56178 289 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 HSPB2Q16082 182 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 DCST2Q5T1A1 773 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.72□□□□□ -0.53
XRN1-203ENST00000463916 RAET1LQ5VY80 246 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 SPATA19Q7Z5L4 167 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 PIWIL2Q8TC59 973 aaKnown RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 DOCK7Q96N67 2140 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 SLCO1B3Q9NPD5 702 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 CLCA1A8K7I4 914 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 FAM47E-STBD1D6RA91 191 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 H0Y3Z8 333 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 OIP5O43482 229 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 MATN1P21941 496 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 GCKP35557 465 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 FOXF2Q12947 444 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 SNTB1Q13884 538 aaKnown RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 GANABQ14697 944 aaKnown RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 NXNQ6DKJ4 435 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 UBQLNLQ8IYU4 475 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 SH3YL1Q96HL8 342 aaPredicted RBP11.72□□□□□ -0.53
XRN1-203ENST00000463916 SDF2Q99470 211 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 PTGES2Q9H7Z7 377 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 VDAC3Q9Y277 283 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 OTOGQ6ZRI0 2925 aa11.72□□□□□ -0.53
XRN1-203ENST00000463916 NPIPB9F8W1W9 429 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 SLCO1B7G3V0H7 640 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 SCDO00767 359 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 FCMRO60667 390 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 TGM6O95932 706 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 IL2RAP01589 272 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 S100A3P33764 101 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 CLNS1AP54105 237 aaKnown RBP11.71□□□□□ -0.53
XRN1-203ENST00000463916 CLDN20P56880 219 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 RCAN2Q14206 197 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 ANXA8L1Q5VT79 327 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 HDXQ7Z353 690 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.53
XRN1-203ENST00000463916 INPP5KQ9BT40 448 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 CLCF1Q9UBD9 225 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 ZNF629Q9UEG4 869 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms