RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HSD3B2P26439 372 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 MAGEA4P43358 317 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 SERPINB8P50452 374 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 C21orf58P58505 322 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 MRPS25P82663 173 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 CSTF3Q12996 717 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 P2RY6Q15077 328 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 UAP1Q16222 522 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 CPTPQ5TA50 214 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 ATG4DQ86TL0 474 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 ROBO4Q8WZ75 1007 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 SLC9A6Q92581 669 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 ZBTB8AQ96BR9 441 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 TIGARQ9NQ88 270 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 A0A096LNT2 108 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 A0A0J9YW62 118 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 PPP6CO00743 305 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 RAMP1O60894 148 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 SLITRK5O94991 958 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 KCNH1O95259 989 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 NTN1O95631 604 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 KRT6AP02538 564 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 KRT6BP04259 564 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 JUNP05412 331 aaKnown RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 SRD5A1P18405 259 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 KRT6CP48668 564 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 ZNF41P51814 821 aaPredicted RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 NCBP2P52298 156 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 CDH11P55287 796 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 ITGADQ13349 1161 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 RAB35Q15286 201 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 TMEM107Q6UX40 140 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 APOOLQ6UXV4 268 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 RPS27LQ71UM5 84 aaKnown RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 BHLHA15Q7RTS1 189 aaPredicted RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 NUFIP2Q7Z417 695 aaKnown RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 TUSC5Q8IXB3 177 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 PLD6Q8N2A8 252 aaKnown RBP12.86□□□□□ -0.35
SMC1A-204ENST00000463684 CDYL2Q8N8U2 506 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 C16orf78Q8WTQ4 265 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 RNF145Q96MT1 663 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
SMC1A-204ENST00000463684 HMX2A2RU54 273 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 C7orf72A4D263 438 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 UPK1AO00322 258 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 MANBAO00462 879 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 LMX1BO60663 402 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 OR4F21O95013 312 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 TSPAN8P19075 237 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 PTNP21246 168 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 GABRA3P34903 492 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 PLTPP55058 493 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 CDH13P55290 713 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 RAE1P78406 368 aaKnown RBP12.85□□□□□ -0.35
SMC1A-204ENST00000463684 ACSM2AQ08AH3 577 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 PPA1Q15181 289 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 STK11Q15831 433 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 ACSM2BQ68CK6 577 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 ABHD3Q8WU67 409 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 FAM168AQ92567 244 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 CPNE4Q96A23 557 aaPredicted RBP12.85□□□□□ -0.35
SMC1A-204ENST00000463684 MUCL1Q96DR8 90 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 GP6Q9HCN6 339 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
SMC1A-204ENST00000463684 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 SHISA9B4DS77 424 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 ULK1O75385 1050 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 PRKD3O94806 890 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 YES1P07947 543 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 RPS17P08708 135 aaKnown RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 GSTM5P46439 218 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 IRX1P78414 480 aaPredicted RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 CAV1Q03135 178 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms