RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PEX2P28328 305 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CASP2P42575 452 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZFP36L2P47974 494 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PPM1FP49593 454 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RPL14P50914 215 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 TDGF1P3P51864 188 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 DIO3P55073 304 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FOXG1P55316 489 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 NME5P56597 212 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RAB8AP61006 207 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ARF3P61204 181 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OLR1P78380 273 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PRKAA1Q13131 559 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RAPSNQ13702 412 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 KIR2DS3Q14952 304 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 KPNB1Q14974 876 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 NCF4Q15080 339 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RBBP5Q15291 538 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 SYT16Q17RD7 645 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RFTN2Q52LD8 501 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FRG2Q64ET8 278 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FAM180BQ6P0A1 224 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 EPGNQ6UW88 154 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FAM198BQ6UWH4 519 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PIGWQ7Z7B1 504 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 LAS2Q8IYD9 372 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 METTL27Q8N6F8 245 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OR5T3Q8NGG3 340 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OR9I1Q8NGQ6 314 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CLHC1Q8NHS4 586 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZCCHC10Q8TBK6 192 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RAB3IL1Q8TBN0 382 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 METTL6Q8TCB7 284 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 MAGEC3Q8TD91 643 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZFPM2Q8WW38 1151 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ATL1Q8WXF7 558 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ATP6V1E2Q96A05 226 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC126Q96EE4 140 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 C11orf24Q96F05 449 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 MAELQ96JY0 434 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 EGLN2Q96KS0 407 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 C10orf90Q96M02 699 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FRG2BQ96QU4 278 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CCT8L2Q96SF2 557 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CD180Q99467 661 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 WDR77Q9BQA1 342 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 C1orf50Q9BV19 199 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RAB11FIP5Q9BXF6 653 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 EBPLQ9BY08 206 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 MS4A8Q9BY19 250 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF385DQ9H6B1 395 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PELI2Q9HAT8 420 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 SNX7Q9UNH6 387 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 RPH3AQ9Y2J0 694 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 POLR3HQ9Y535 204 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CSAG2Q9Y5P2 127 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 KCNE2Q9Y6J6 123 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ACANP16112 2415 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 TNRC6AQ8NDV7 1962 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 SEC16AO15027 2179 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 A0A0G2JND7 137 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TRBC2A0A5B9 178 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TLCD2A6NGC4 264 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 E9PBE3 544 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 C19orf84I3L1E1 186 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 PLPP1O14494 284 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD28O15084 1053 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 NADKO95544 446 aaPredicted RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MLYCDO95822 493 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SERPIND1P05546 499 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 UROSP10746 265 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 IL1RNP18510 177 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 GNAZP19086 355 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 IL12AP29459 219 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 CMPK1P30085 196 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 HMOX2P30519 316 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 BSGP35613 385 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 HSD17B2P37059 387 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 CCR8P51685 355 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 HNRNPFP52597 415 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 PKNOX1P55347 436 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 RPL38P63173 70 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MAT1AQ00266 395 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ID2Q02363 134 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 FHL3Q13643 280 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 PRTGQ2VWP7 1150 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ADPRMQ3LIE5 342 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TOR1AIP1Q5JTV8 583 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 C6orf136Q5SQH8 315 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ATG16L1Q676U5 607 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD26P1Q6NSI1 321 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MED27Q6P2C8 311 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MTFR2Q6P444 385 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TMIGD1Q6UXZ0 262 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SPATA21Q7Z572 469 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 RAB43Q86YS6 212 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms