RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 BPGMP07738 259 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 ALOX5P09917 674 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 ACP2P11117 423 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 CREB1P16220 341 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PSMA4P25789 261 aaKnown RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 MAPK1P28482 360 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 ETV4P43268 484 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 KIR2DL2P43627 348 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 SERPINB4P48594 390 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PRIM2P49643 509 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PRKAG1P54619 331 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 C21orf58P58505 322 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 IFFO1Q0D2I5 559 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 FGFBP1Q14512 234 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 DUSP5Q16690 384 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 GALNTL6Q49A17 601 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 C6orf136Q5SQH8 315 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 RAET1LQ5VY80 246 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PLXDC2Q6UX71 529 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 CAMKMTQ7Z624 323 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 MISPQ8IVT2 679 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 RIMKLAQ8IXN7 391 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 DDIASQ8IXT1 998 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 GCNT2Q8N0V5 402 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 GTPBP8Q8N3Z3 284 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 MREGQ8N565 214 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 METTL25Q8N6Q8 603 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 CLHC1Q8NHS4 586 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 OR5P2Q8WZ92 322 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 FIG4Q92562 907 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 SLC9A6Q92581 669 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 FAM120BQ96EK7 910 aaKnown RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 RMND5BQ96G75 393 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 C16orf58Q96GQ5 468 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 C3orf30Q96M34 536 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 DOCK7Q96N67 2140 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 ZIM3Q96PE6 472 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 STACQ99469 402 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 MECRQ9BV79 373 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 BTBD2Q9BX70 525 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 LIME1Q9H400 295 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PIGUQ9H490 435 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 PLEKHF2Q9H8W4 249 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 RNF122Q9H9V4 155 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 EQTNQ9NQ60 294 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 UBQLN4Q9NRR5 601 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 DUSP22Q9NRW4 184 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 CCM2LQ9NUG4 571 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-207ENST00000461798 STOML1Q9UBI4 398 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 ZDHHC2Q9UIJ5 367 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 FIS1Q9Y3D6 152 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 A0A1W2PRB8 838 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 H0YC42 278 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 SCAMP2O15127 329 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ADAMDEC1O15204 470 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 NDUFB5O43674 189 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 PEX11AO75192 247 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 SLU7O95391 586 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 OXSR1O95747 527 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 HRGP04196 525 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 HMGN2P05204 90 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 CD8BP10966 210 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 LAMP1P11279 417 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF17P17021 662 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 IL11P20809 199 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 PRPS1L1P21108 318 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 TCEA1P23193 301 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 DNASE1P24855 282 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 HPCAL1P37235 193 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 RFX3P48380 749 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 TPD52P55327 224 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 CLDN20P56880 219 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 RPS3AP61247 264 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 EMX2Q04743 252 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 STX5Q13190 355 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 SMU1Q2TAY7 513 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ATP6AP1LQ52LC2 224 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 CPTPQ5TA50 214 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 IL23RQ5VWK5 629 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF474Q6S9Z5 364 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ZCCHC23Q6ZST2 131 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 P4HA3Q7Z4N8 544 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 LUZP2Q86TE4 346 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 GGNQ86UU5 652 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 UBQLNLQ8IYU4 475 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 OR5M1Q8NGP8 315 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 SMPDL3BQ92485 455 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ADGRG7Q96K78 797 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 PRPF18Q99633 342 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ATAD3AQ9NVI7 634 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 FBXO34Q9NWN3 711 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 PAQR5Q9NXK6 330 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ASIC5Q9NY37 505 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 ELOVL5Q9NYP7 299 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 NDRG3Q9UGV2 375 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 MPDZO75970 2070 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms