RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 PLSCR4Q9NRQ2 329 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 C6orf203Q9P0P8 240 aaPredicted RBP16.05■□□□□ 0.16
SSB-206ENST00000461708 PROCRQ9UNN8 238 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 CSPG4Q6UVK1 2322 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 FN1P02751 2386 aaKnown RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 FAM171A2A8MVW0 826 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 ADAMDEC1O15204 470 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 NDUFB5O43674 189 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 AQP8O94778 261 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 CHEK2O96017 543 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 INHBBP09529 407 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 DDX5P17844 614 aaKnown RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 SDC1P18827 310 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 ASMTP46597 345 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 MANFP55145 182 aaKnown RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 SLC18A2Q05940 514 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 MLC1Q15049 377 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 ACKR1Q16570 336 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 SGCBQ16585 318 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 EXOSC6Q5RKV6 272 aaKnown RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 MFSD12Q6NUT3 480 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 C20orf204Q6ZNR8 217 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 NUP43Q8NFH3 380 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 OR6K3Q8NGY3 331 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 OR4C3Q8NH37 302 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 CIDECQ96AQ7 238 aaPredicted RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 ZBTB8AQ96BR9 441 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 GIMAP5Q96F15 307 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 GMPPAQ96IJ6 420 aaPredicted RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 EQTNQ9NQ60 294 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 UBQLN4Q9NRR5 601 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 GLRX2Q9NS18 164 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 EMC9Q9Y3B6 208 aa16.04■□□□□ 0.16
SSB-206ENST00000461708 RAI1Q7Z5J4 1906 aaPredicted RBP16.04■□□□□ 0.16
SSB-206ENST00000461708 HEATR5AQ86XA9 2040 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 SMPD2O60906 423 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 OXSR1O95747 527 aaPredicted RBP16.03■□□□□ 0.16
SSB-206ENST00000461708 SHBGP04278 402 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 FGF4P08620 206 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 KRT4P19013 534 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 PSMA4P25789 261 aaKnown RBP16.03■□□□□ 0.16
SSB-206ENST00000461708 KCNJ5P48544 419 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 SERPINB4P48594 390 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 RAC1P63000 192 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 RFTN2Q52LD8 501 aaPredicted RBP16.03■□□□□ 0.16
SSB-206ENST00000461708 ZNF385BQ569K4 471 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 CPTPQ5TA50 214 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 KANK2Q63ZY3 851 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 ANKRD26P1Q6NSI1 321 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 LRIG3Q6UXM1 1119 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 R3HCC1LQ7Z5L2 792 aaKnown RBP16.03■□□□□ 0.16
SSB-206ENST00000461708 EXOC3L1Q86VI1 746 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 OR2T11Q8NH01 316 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.03■□□□□ 0.16
SSB-206ENST00000461708 PIK3IP1Q96FE7 263 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 ADGRG7Q96K78 797 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 FANCFQ9NPI8 374 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 DNAJC15Q9Y5T4 150 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 PTGDR2Q9Y5Y4 395 aa16.03■□□□□ 0.16
SSB-206ENST00000461708 A0A1W2PQD3 144 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 EIF1AYO14602 144 aaKnown RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 LSM1O15116 133 aaKnown RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 TRIM13O60858 407 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 SS18L1O75177 396 aaPredicted RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 KCNK2O95069 426 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 ACP2P11117 423 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 LOXP28300 417 aaPredicted RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 EIF1AXP47813 144 aaKnown RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 PCLAFQ15004 111 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 CTU2Q2VPK5 515 aaKnown RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 ESPNLQ6ZVH7 1005 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 P3H2Q8IVL5 708 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 C10orf107Q8IVU9 208 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 SLC16A11Q8NCK7 471 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 OR10D3Q8NH80 312 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 SLC9A6Q92581 669 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 TSSK3Q96PN8 268 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 GATA5Q9BWX5 397 aaPredicted RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 PRRG4Q9BZD6 226 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 OR10A4Q9H209 315 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 TUBB1Q9H4B7 451 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 MKS1Q9NXB0 559 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 GIN1Q9NXP7 522 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 SH3BP4Q9P0V3 963 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 MCTS1Q9ULC4 181 aaKnown RBP16.02■□□□□ 0.16
SSB-206ENST00000461708 VDAC3Q9Y277 283 aa16.02■□□□□ 0.16
SSB-206ENST00000461708 HIVEP2P31629 2446 aa16.02■□□□□ 0.15
SSB-206ENST00000461708 NUP214P35658 2090 aaPredicted RBP16.01■□□□□ 0.15
SSB-206ENST00000461708 A0A1W2PRB8 838 aa16.01■□□□□ 0.15
SSB-206ENST00000461708 AKAP10O43572 662 aa16.01■□□□□ 0.15
SSB-206ENST00000461708 SOX30O94993 753 aa16.01■□□□□ 0.15
SSB-206ENST00000461708 ALOX5P09917 674 aa16.01■□□□□ 0.15
SSB-206ENST00000461708 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
SSB-206ENST00000461708 EIF1P41567 113 aaKnown RBP16.01■□□□□ 0.15
SSB-206ENST00000461708 SLC6A8P48029 635 aa16.01■□□□□ 0.15
SSB-206ENST00000461708 ZNF41P51814 821 aaPredicted RBP16.01■□□□□ 0.15
SSB-206ENST00000461708 PRKAG1P54619 331 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms