RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FREM3P0C091 2139 aa13.96□□□□□ -0.18
VARS-219ENST00000461328 CREBBPQ92793 2442 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 C9JVG2 144 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 DVL2O14641 736 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 DIAPH2O60879 1101 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 IL2RAP01589 272 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 LCN1P31025 176 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 UFM1P61960 85 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 C17orf67Q0P5P2 114 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 SLC9B1Q4ZJI4 515 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 DCST2Q5T1A1 773 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 DMRTC2Q8IXT2 367 aaPredicted RBP13.95□□□□□ -0.18
VARS-219ENST00000461328 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 FADS6Q8N9I5 356 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 TNIP2Q8NFZ5 429 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 OR5D16Q8NGK9 328 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 MARK4Q96L34 752 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 OR7D2Q96RA2 312 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 RTN4RQ9BZR6 473 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 GPATCH2Q9NW75 528 aa13.95□□□□□ -0.18
VARS-219ENST00000461328 PRSS51A0A1B0GVH4 220 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 KDM4EB2RXH2 506 aaPredicted RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 ALG1L2C9J202 215 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 ANKRD28O15084 1053 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 SOX30O94993 753 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 NGFRP08138 427 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 IDO1P14902 403 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 CPN1P15169 458 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 POU3F2P20265 443 aaPredicted RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 TBXA2RP21731 343 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 MATN1P21941 496 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 BMP5P22003 454 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 CEACAM8P31997 349 aaPredicted RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 TIMP3P35625 211 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 CHI3L1P36222 383 aaPredicted RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 STARP49675 285 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 HCFC1P51610 2035 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 MYBPHQ13203 477 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 FLYWCH1Q4VC44 716 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 EXOSC6Q5RKV6 272 aaKnown RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 DCHS2Q6V1P9 2916 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 C6orf120Q7Z4R8 191 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 ZNF614Q8N883 585 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 NAXEQ8NCW5 288 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 FAM110BQ8TC76 370 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 C1GALT1C1Q96EU7 318 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 SH3YL1Q96HL8 342 aaPredicted RBP13.94□□□□□ -0.18
VARS-219ENST00000461328 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 FBXO34Q9NWN3 711 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 USH1CQ9Y6N9 552 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 ARHGAP21Q5T5U3 1957 aa13.94□□□□□ -0.18
VARS-219ENST00000461328 NPIPA5A0A0B4J1W7 369 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 B4DXG7 233 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 NPIPA7E9PJI5 369 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 H3BNH8 94 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 NPIPA8P0DM63 369 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 UQCRC2P22695 453 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 CHMP24386 653 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 DGKQP52824 942 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 CASP9P55211 416 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 GFRA1P56159 465 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 APOOLQ6UXV4 268 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 CHMP1BQ7LBR1 199 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 C16orf62Q7Z3J2 963 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 MAVSQ7Z434 540 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 MISPQ8IVT2 679 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 UBQLNLQ8IYU4 475 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 RELL2Q8NC24 303 aaPredicted RBP13.93□□□□□ -0.18
VARS-219ENST00000461328 ZPLD1Q8TCW7 415 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 ACTRT2Q8TDY3 377 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 SMPDL3BQ92485 455 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 LRRC46Q96FV0 321 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 TEX37Q96LM6 180 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 C7orf26Q96N11 449 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 OR52E6Q96RD3 313 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 PANX1Q96RD7 426 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 ZNF559Q9BR84 538 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 PIGQQ9BRB3 760 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 CALHM2Q9HA72 323 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 MCCC2Q9HCC0 563 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 INTS9Q9NV88 658 aaKnown RBP13.93□□□□□ -0.18
VARS-219ENST00000461328 VDAC3Q9Y277 283 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
VARS-219ENST00000461328 GPR45Q9Y5Y3 372 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 KCNE3Q9Y6H6 103 aa13.93□□□□□ -0.18
VARS-219ENST00000461328 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 DUXAA6NLW8 204 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 H3BML4 177 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 UBDO15205 165 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 POLR3GO15318 223 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 SEC14L5O43304 696 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms