RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SH2D2AQ9NP31 389 aa13.38□□□□□ -0.27
NCK1-202ENST00000460960 SAR1AQ9NR31 198 aa13.38□□□□□ -0.27
NCK1-202ENST00000460960 FLRT3Q9NZU0 649 aa13.38□□□□□ -0.27
NCK1-202ENST00000460960 BTNL2Q9UIR0 455 aa13.38□□□□□ -0.27
NCK1-202ENST00000460960 NPFFR2Q9Y5X5 522 aa13.38□□□□□ -0.27
NCK1-202ENST00000460960 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.38□□□□□ -0.27
NCK1-202ENST00000460960 DNHD1Q96M86 4753 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 RNF103-CHMP3A0A140T963 221 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SYT5O00445 386 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 TO15178 435 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 HCN1O60741 890 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 ATE1O95260 518 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 IL6P05231 212 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 INHBBP09529 407 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 HOXB9P17482 250 aaPredicted RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 DDX5P17844 614 aaKnown RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 GABRA3P34903 492 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 TRPC1P48995 793 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 FOXO1Q12778 655 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 DUSP5Q16690 384 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SPDYE7PQ495Y7 208 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 PRAMEF20Q5VT98 475 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 OLIG3Q7RTU3 272 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 ZAR1Q86SH2 424 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 ULK2Q8IYT8 1036 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 NATD1Q8N6N6 113 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 OR5D16Q8NGK9 328 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SLC22A8Q8TCC7 542 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SFXN5Q8TD22 340 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SLC9A6Q92581 669 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 AURKBQ96GD4 344 aaPredicted RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 C3orf14Q9HBI5 128 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 PROK2Q9HC23 129 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 FBXO34Q9NWN3 711 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 SLAMF8Q9P0V8 285 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 CFL2Q9Y281 166 aa13.37□□□□□ -0.27
NCK1-202ENST00000460960 CHCHD2Q9Y6H1 151 aaPredicted RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 HRNRQ86YZ3 2850 aaPredicted RBP13.37□□□□□ -0.27
NCK1-202ENST00000460960 C15orf38-AP3S2A0A0A6YYH1 394 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 TUBAL3A6NHL2 446 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 CCDC154A6NI56 674 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 C17orf51A8MQB3 221 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 SNX3O60493 162 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 UGT2B11O75310 529 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 PRR5P85299 388 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 PLCXD2Q0VAA5 305 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 POU4F3Q15319 338 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 NTRK2Q16620 822 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 CCNJQ5T5M9 372 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 METTL21CQ5VZV1 264 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 C6orf120Q7Z4R8 191 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 MSRB3Q8IXL7 192 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 TAGAPQ8N103 731 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 FBXW8Q8N3Y1 598 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 SLC15A4Q8N697 577 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 FAM13CQ8NE31 585 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 TNIP2Q8NFZ5 429 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 PNPT1Q8TCS8 783 aaKnown RBP13.36□□□□□ -0.27
NCK1-202ENST00000460960 CDS1Q92903 461 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 HGDQ93099 445 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 EFHD2Q96C19 240 aaPredicted RBP13.36□□□□□ -0.27
NCK1-202ENST00000460960 SLC35A4Q96G79 324 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 NODALQ96S42 347 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 SLC35A5Q9BS91 424 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 PAIP1Q9H074 479 aaKnown RBP13.36□□□□□ -0.27
NCK1-202ENST00000460960 ARMCX1Q9P291 453 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
NCK1-202ENST00000460960 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 FREM3P0C091 2139 aa13.36□□□□□ -0.27
NCK1-202ENST00000460960 TSPAN2O60636 221 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 PPM1BO75688 479 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 NKX2-2O95096 273 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 RFPL3SP0C7P2 107 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 UQCRC2P22695 453 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 DCAF7P61962 342 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 KLF10Q13118 480 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 HYAL4Q2M3T9 481 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 COX20Q5RI15 118 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 SAXO2Q658L1 398 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 ZNF621Q6ZSS3 439 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 SEM1Q6ZVN7 128 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 CDRT4Q8N9R6 151 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 NAXEQ8NCW5 288 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 OR56A1Q8NGH5 318 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 LINC01560Q8TB33 94 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 GPR151Q8TDV0 419 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 JADE3Q92613 823 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 HSPBAP1Q96EW2 488 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 ADOQ96SZ5 270 aa13.35□□□□□ -0.27
NCK1-202ENST00000460960 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
NCK1-202ENST00000460960 SLC25A37Q9NYZ2 338 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms