RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 RBM4Q9BWF3 364 aaKnown RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 SPATA9Q9BWV2 254 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 TMEM121BQ9BXQ6 578 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 SEMA6AQ9H2E6 1030 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 OR51M1Q9H341 326 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 C12orf49Q9H741 205 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ZSCAN32Q9NX65 697 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 MS4A12Q9NXJ0 267 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 NKIRAS2Q9NYR9 191 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 NAALAD2Q9Y3Q0 740 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ZNF780BQ9Y6R6 833 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SPACA6W5XKT8 324 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ARID1BQ8NFD5 2236 aaPredicted RBP9.69□□□□□ -0.86
HERC4-207ENST00000460168 ISPDA4D126 451 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 PATE3B3GLJ2 98 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 RASAL1O95294 804 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 LCKP06239 509 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 STSP08842 583 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 NUDT7P0C024 238 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 ETFAP13804 333 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 PRF1P14222 555 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 BMI1P35226 326 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 FEN1P39748 380 aaKnown RBP9.69□□□□□ -0.86
HERC4-207ENST00000460168 ARL4DP49703 201 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 GNG10P50151 68 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 AKR1D1P51857 326 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 MLC1Q15049 377 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 FAM98BQ52LJ0 330 aaKnown RBP9.69□□□□□ -0.86
HERC4-207ENST00000460168 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 COX20Q5RI15 118 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 PERM1Q5SV97 790 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 PEAR1Q5VY43 1037 aaPredicted RBP9.69□□□□□ -0.86
HERC4-207ENST00000460168 USP53Q70EK8 1073 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 RABEPKQ7Z6M1 372 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 TMEM126BQ8IUX1 230 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 ZZZ3Q8IYH5 903 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 CEP76Q8TAP6 659 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 NETO1Q8TDF5 533 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 SAP25Q8TEE9 199 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 MAL2Q969L2 176 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 CNRIP1Q96F85 164 aaPredicted RBP9.69□□□□□ -0.86
HERC4-207ENST00000460168 AMDHD1Q96NU7 426 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 COPS4Q9BT78 406 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 SLC22A4Q9H015 551 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 RACGAP1Q9H0H5 632 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 GLIPR2Q9H4G4 154 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 ANKHQ9HCJ1 492 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 GPATCH2Q9NW75 528 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 PCDH15Q96QU1 1955 aa9.69□□□□□ -0.86
HERC4-207ENST00000460168 A0A1W2PPW3 197 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 SLC31A2O15432 143 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 GALR3O60755 368 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 SERPINA1P01009 418 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 APOA1P02647 267 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 FCER2P06734 321 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CTSBP07858 339 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 GNAO1P09471 354 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SMIM6P0DI80 62 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CD247P20963 164 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 FASP25445 335 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MPIP34949 423 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 WNT5AP41221 380 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CCT3P49368 545 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 PGDP52209 483 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SKP1P63208 163 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CHRNB3Q05901 458 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 TP53BP2Q13625 1128 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 RUNX2Q13950 521 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 IRAK1BP1Q5VVH5 260 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 WDR73Q6P4I2 378 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 BHLHB9Q6PI77 547 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 DEGS2Q6QHC5 323 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MEX3BQ6ZN04 569 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 ETV3LQ6ZN32 361 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 PTOV1Q86YD1 416 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 DNAJC22Q8N4W6 341 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SLC24A4Q8NFF2 622 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 OR4C6Q8NH72 309 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 BARD1Q99728 777 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 UGT2B28Q9BY64 529 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 RASSF1Q9NS23 344 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 DCAF13Q9NV06 445 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 ING3Q9NXR8 418 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 KCMF1Q9P0J7 381 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 GLS2Q9UI32 602 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CES1P1Q9UKY3 287 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 PLCL2Q9UPR0 1127 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MN1Q10571 1320 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 TTC28Q96AY4 2481 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 WDR87Q6ZQQ6 2873 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ADAMTS9Q9P2N4 1935 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 UNC13CQ8NB66 2214 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ASXL3Q9C0F0 2248 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SGK494L7N484 410 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ABCD4O14678 606 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 B4GAT1O43505 415 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms