RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 TMEM107Q6UX40 140 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 ESPNLQ6ZVH7 1005 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 BHLHA15Q7RTS1 189 aaPredicted RBP7.03□□□□□ -1.28
HPS4-207ENST00000459918 CCDC91Q7Z6B0 441 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 GALNT10Q86SR1 603 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 FBXL14Q8N1E6 418 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 DEPDC4Q8N2C3 294 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 ARIH2OSQ8N7S6 290 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 GATSQ8NAP1 163 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 OR7G2Q8NG99 324 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 OR4F6Q8NGB9 312 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 OR2V1Q8NHB1 315 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 ABHD3Q8WU67 409 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 ROBO4Q8WZ75 1007 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 ZNF775Q96BV0 537 aaPredicted RBP7.03□□□□□ -1.28
HPS4-207ENST00000459918 C11orf24Q96F05 449 aaPredicted RBP7.03□□□□□ -1.28
HPS4-207ENST00000459918 RNF145Q96MT1 663 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 TRAF4Q9BUZ4 470 aaPredicted RBP7.03□□□□□ -1.28
HPS4-207ENST00000459918 C3orf14Q9HBI5 128 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 MIEF1Q9NQG6 463 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 WHRNQ9P202 907 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 B3GALT5Q9Y2C3 310 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 PCNX3Q9H6A9 2034 aa7.03□□□□□ -1.28
HPS4-207ENST00000459918 LOC100289279A0A1B0GTE1 492 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 FADS1O60427 444 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 RAMP1O60894 148 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 LYZL6O75951 148 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 KLHL2O95198 593 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 UTS2O95399 124 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 JUNP05412 331 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 C2P06681 752 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 GSTA2P09210 222 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TSPAN8P19075 237 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 IL11P20809 199 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 NTSP30990 170 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 PAFAH1B1P43034 410 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 SERPINB8P50452 374 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 CARD18P57730 90 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 GNG11P61952 73 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TRA2BP62995 288 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 VLDLRP98155 873 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 PSG6Q00889 435 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 LOXL1Q08397 574 aaPredicted RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 CSTF3Q12996 717 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 ITGADQ13349 1161 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 SQLEQ14534 574 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 RNPS1Q15287 305 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.02□□□□□ -1.29
HPS4-207ENST00000459918 FAM120AOSQ5T036 256 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 MFSD12Q6NUT3 480 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 METTL2BQ6P1Q9 378 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 SLC22A25Q6T423 547 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 C12orf54Q6X4T0 127 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TUSC5Q8IXB3 177 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 CENPLQ8N0S6 344 aaPredicted RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 LILRA2Q8N149 483 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 ATP6V1C2Q8NEY4 427 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 GPR151Q8TDV0 419 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 FBF1Q8TES7 1133 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 ZBTB8AQ96BR9 441 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 SH3YL1Q96HL8 342 aaPredicted RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 ZNF681Q96N22 645 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 NSUN5Q96P11 429 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 USB1Q9BQ65 265 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 EBPLQ9BY08 206 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TRIM2Q9C040 744 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 BRF2Q9HAW0 419 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 EQTNQ9NQ60 294 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 SLC35C2Q9NQQ7 365 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 KLHL13Q9P2N7 655 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 VPS29Q9UBQ0 182 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 RNF14Q9UBS8 474 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 DMGDHQ9UI17 866 aaKnown RBP7.02□□□□□ -1.29
HPS4-207ENST00000459918 PCTPQ9UKL6 214 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 TMCO1Q9UM00 188 aa7.02□□□□□ -1.29
HPS4-207ENST00000459918 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
HPS4-207ENST00000459918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.01□□□□□ -1.294e-7■■■■□ 19.8
HPS4-207ENST00000459918 A0A087WZY1 265 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 CCDC189A1A4V9 331 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 DPRXA6NFQ7 191 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 GJE1A6NN92 205 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 CCDC188H7C350 402 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 EIF3HO15372 352 aaKnown RBP eCLIP7.01□□□□□ -1.29
HPS4-207ENST00000459918 WIPF1O43516 503 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 SPRY1O43609 319 aaPredicted RBP7.01□□□□□ -1.29
HPS4-207ENST00000459918 PLOD3O60568 738 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 GCM2O75603 506 aaPredicted RBP7.01□□□□□ -1.29
HPS4-207ENST00000459918 KRT6AP02538 564 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 KRT6BP04259 564 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 CSF3P09919 207 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 IGHV4-31P0DP07 118 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 USF1P22415 310 aaPredicted RBP7.01□□□□□ -1.29
HPS4-207ENST00000459918 IGFBP5P24593 272 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 HMOX2P30519 316 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 GABRA3P34903 492 aa7.01□□□□□ -1.29
HPS4-207ENST00000459918 GPC1P35052 558 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms